Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq150 192 8e-44 >seq150 Length=1432513 Score = 192 bits (212), Expect = 8e-44 Identities = 303/432 (70%), Gaps = 3/432 (1%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || |||||| |||||| ||||| |||||||| | | || || |||||||| ||||| Sbjct 453176 CAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGT 453235 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || |||||||| || || ||||| |||||||||||||||| |||||||| || || || Sbjct 453236 CAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAA 453295 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGC-TGTC 50132 |||||| || || |||||||| ||||| || |||| ||| || |||| | ||| |||| Sbjct 453296 GAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTC 453355 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 |||||| |||||||||| |||||||| || | || || || || || ||||| Sbjct 453356 CGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGC 453415 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 | ||| || || | || | || || | || || ||||| | || ||| Sbjct 453416 GTCAAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATA 453475 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 | || ||||||||||| || || || || || || |||||||||| ||||| | Sbjct 453476 TGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGC 453535 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 | |||||||| | | || || || | | || || |||||||| || || ||| Sbjct 453536 AGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAGGC 453595 Query 50373 TGCAAAAAACGC 50384 || || || || Sbjct 453596 GGCGAAGAATGC 453607 Score = 181 bits (200), Expect = 2e-40 Identities = 377/557 (68%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || |||||| ||||| ||||| || | || || || ||||| || |||||||| Sbjct 455568 CAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGG 455509 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| |||||||||||||| || ||||| |||||| Sbjct 455508 CCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAG 455449 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGC-TGTCATGT 50136 || || || ||||| || ||||| || |||| ||| || | || | ||| ||||| Sbjct 455448 ATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGTCAGCG 455389 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| || |||||||| || | || || || || || ||||||| Sbjct 455388 ATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCG 455329 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || | | | ||| || || | || || ||||| | || ||| | Sbjct 455328 AATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACGTC 455269 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || ||||||||||| | ||||| | | Sbjct 455268 TCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCGCC 455209 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || | | || || || | | || || || || || ||||| || || Sbjct 455208 TGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCG 455149 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAGTTTATTCCAA 50433 || || || | ||||| || || ||| |||||| || | | || ||||| Sbjct 455148 AAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTCCAG 455089 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || || || || | || | || || || ||||| ||||| ||||| ||||| Sbjct 455088 TCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGCCTTC 455029 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 455028 TTGTACATCTGCCAGAT 455012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266770890640