Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq150 98.7 1e-15 >seq150 Length=1432513 Score = 98.7 bits (108), Expect = 1e-15 Identities = 284/434 (65%), Gaps = 10/434 (2%) Strand=Plus/Plus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| |||||||| || | ||||| || | | || || ||||| || || || | Sbjct 453179 ACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAG 453238 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990 || ||||| | || || || || | ||||||||| ||||||||||| ||||| ||||| Sbjct 453239 CCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAA 453298 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14050 || ||||| ||||| || || || | || ||| || |||| || |||| ||| Sbjct 453299 GATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTCCGA 453358 Query 14051 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14110 |||||| |||||| || | || || || || | ||||| || || || | Sbjct 453359 TATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTC 453418 Query 14111 AAATAAATATTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14168 ||||| || ||||| || |||| ||||| || || || || | ||| Sbjct 453419 AAATAGGCGGTCTCGCTCTTGCGGGTCCTTG--ATGTACGTGTCGATGAGCAGCGAATAT 453476 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGAC 14228 | || || || ||||| ||||| ||| || || ||||| || |||| || |||| Sbjct 453477 GTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGCA 453536 Query 14229 CATTGTACTTC---CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 ||| ||||| |||| || | ||| | | || || || ||||| ||||| Sbjct 453537 GCTTGCACTTCATTCGAG---AAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAG 453593 Query 14286 GCTGCAAAAAATGC 14299 || || || ||||| Sbjct 453594 GCGGCGAAGAATGC 453607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726644768400