Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq57 95.1 9e-15 seq199 91.5 1e-13 seq1 89.7 4e-13 >seq57 Length=802683 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 42913 GTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCG 42972 ||||||||||| || | ||||| ||||| | || || |||| || | || || || Sbjct 363111 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTGCTTACCA 363052 Query 42973 GCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTG 43032 || || ||||| |||||||| || | || | ||||| || || |||| | | || Sbjct 363051 GCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTA 362992 Query 43033 ACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTT 43092 || || | | ||||||| || |||||| || | || ||||| ||||| || ||||| Sbjct 362991 ACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGAGTC 362932 Query 43093 TTCACAAAAATTTGCAT 43109 || || || |||||||| Sbjct 362931 TTGACGAAGATTTGCAT 362915 >seq199 Length=104010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 42901 ACCAA-ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||| ||| | ||||||||||| || | ||||| || || | || || |||| || Sbjct 100614 ACCAAGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTC 100555 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 | || ||||| || || ||||| |||||||| || | || | ||||| || || Sbjct 100554 GAGCTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTG 100495 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 |||| | | || || || | | ||||||| || |||||| || | || ||||| || Sbjct 100494 GATCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTT 100435 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || || || || || || |||||||| Sbjct 100434 TCCTGTCAGGGTCTTGACGAAGATTTGCAT 100405 >seq1 Length=2270075 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||||||||||| ||||| | || || | || ||||| ||||| Sbjct 786413 CTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCGAGCTGCTTGCCCGCAAA 786472 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||| ||||| ||||||| || | ||| || || || |||| | | || || | Sbjct 786473 GATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 786532 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| |||||| | |||||| || | ||| || || || || || || || || || Sbjct 786533 ATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTGCCCGTGAGTGTCTTGAC 786592 Query 43098 AAAAATTTGCAT 43109 ||| || ||||| Sbjct 786593 AAAGATCTGCAT 786604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368549565108