Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq150 210 3e-49 >seq150 Length=1432513 Score = 210 bits (232), Expect = 3e-49 Identities = 386/560 (69%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||||||||| ||| |||| || Sbjct 455012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACCTC 455071 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || ||| || | |||||| | || || || Sbjct 455072 TCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACAACGAGCGACACTTCATCTCC 455131 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 || | | || ||||| |||| ||||| || ||||||||||| || | ||| || || Sbjct 455132 CATGTCCTTGCTTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGA-GCG 455190 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| | ||| | || | | |||| | || || ||||| ||||| || ||| Sbjct 455191 TTTCTCCAACGAG--GTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATG 455248 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | ||||| || | |||||| || || |||| ||||| || || Sbjct 455249 ATGGAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTACATCAAGGACCCT 455308 Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||| || | ||| || || | || |||||||| | || | || || ||| Sbjct 455309 AAGCAGCGCGAGCAC---CTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAG 455365 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| | || ||||||| |||| | ||| | || || |||||||| Sbjct 455366 GCGGACTGGGCTCTCCGCTGGATCGCTGACAAGCGGTCGAGCTTTGCTGAGCGACTGGTG 455425 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||| || || ||||| |||||||| || || |||||| |||| || |||||| Sbjct 455426 GCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTTGCGTCCATATTCTGGCTC 455485 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || ||||||||||| || ||| | |||||| | || || || ||| Sbjct 455486 AAGAAGCGTGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGAG 455545 Query 125553 GGCCTACACTGTGACTTTGC 125572 ||| | ||| || ||||| Sbjct 455546 GGCATGCACACCGATTTTGC 455565 Score = 152 bits (168), Expect = 8e-32 Identities = 363/546 (66%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 125028 ATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGAC 125087 |||||||| | || |||| || || ||||| | |||||| | || || || | ||| Sbjct 453727 ATGTACAAGCAAGCCGAGGCATCTTTCTGGACAGCGGAAGAGATAGACCTTTCACACGAC 453668 Query 125088 CTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTG 125147 | | || ||| | ||| | | || ||||| | || || |||||| | | Sbjct 453667 CACTGGGACTGGAACCATCGCCTCAACGACGACGAGCGGCACTTCATCTCGCACGTCCTC 453608 Query 125148 GCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCA 125206 || ||||| |||| ||||||||| || || ||||| || || || || || ||||| | Sbjct 453607 GCATTCTTCGCCGCCTCCGATGGCATAGTGAACGAGAACCTTGTCGAG-CGCTTCTCGAA 453549 Query 125207 AGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGT 125266 || || | | |||| || || || || |||||||| ||||| |||||| | Sbjct 453548 TGAAGTGCAAGCTGCGGAGGCACGATGTTTCTATGGCTTCCAAATAATGATGGAGAACAT 453489 Query 125267 GCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACA 125326 || || || | || || || || |||| |||||| || |||||| | | Sbjct 453488 TCATTCCGAGACATATTCGCTGCTCATCGACACGTACATCAAGGACCCGCAAGAGCGAGA 453429 Query 125327 CATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGAT 125386 | || ||| |||| ||||| || | |||| || || ||||| | |||| | Sbjct 453428 CCGCCTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGGGCTCT 453369 Query 125387 TCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGT 125446 || ||||| ||| | ||| | || || |||| ||||| |||||||| || Sbjct 453368 CCGCTGGATATCGGACAAGCGGTCAAGTTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGT 453309 Query 125447 AGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACT 125506 ||||| |||||||| || || ||||| ||||| |||||||| ||||||||||| || Sbjct 453308 CGAGGGTATCTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAAGAAGCGCGGGCT 453249 Query 125507 CATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGA 125566 ||||||||| |||||| | |||||| | ||| || |||||||| | ||| || Sbjct 453248 CATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGA 453189 Query 125567 CTTTGC 125572 ||||| Sbjct 453188 TTTTGC 453183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057106507760