Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq183 109 4e-19 >seq183 Length=1202715 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 25796 ||||| || || ||| ||| | |||||| || | || ||| ||||||| || ||||| Sbjct 46801 AGCTGGTCGACGCCCTGCCCGGTGTAGTCCGCGTCGCA-GTCTGTGTACTTCGCGCCGAA 46859 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 | |||||||||||| || |||||||| || |||||||| ||| ||| ||| | | || Sbjct 46860 GTGCCTCCACTGGAAGCCATACACCGGGCCCAGGTCTCCTTCTCTCCTATGCCCCAGTCC 46919 Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916 | ||| || | || || || ||||| | ||||| ||||| | |||||| |||| Sbjct 46920 ACGCTTCTCGAGGAATTCCTTGCTCCCATTCCCATCCCAAATCTTGATGCCCTTCGCGGA 46979 Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965 || ||||| | || || || | || |||||| ||||| ||| || Sbjct 46980 CAGAAGCTTGGAATCAGTCGAGCCGCGGATGAACCATAGCAGTTCCTCC 47028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136663133498