Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq57 91.5 1e-13
seq199 87.8 2e-12
>seq57
Length=802683
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|||||||||||||| || || ||||||||||| | | || ||||||| ||||||
Sbjct 362559 TGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGC 362500
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || | || | |||||||||||| || | || ||||||||| || ||
Sbjct 362499 TTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTT 362440
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | ||||| || | ||||||| |||| || ||||| || || ||
Sbjct 362439 GCCTTCACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCAGTA 362380
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|| || || || || ||||||||
Sbjct 362379 AGGGTCTTGACGAAGATCTGCAT 362357
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || ||||||||||| || |||||||| || | | |||| |||| || |||||
Sbjct 363118 ATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTG 363059
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| || | || |||||||| || ||| || | | |||||||||| || ||
Sbjct 363058 CTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 362999
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
| ||| | | | || || || |||| |||||| ||| | || || || || ||
Sbjct 362998 CGCCTTAACGTTGTCG--ATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCT 362941
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || || |||||
Sbjct 362940 GTCAGAGTCTTGACGAAGATTTGCAT 362915
Score = 87.8 bits (96), Expect = 2e-12
Identities = 163/238 (68%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 48490 ACAGTCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGT 48548
||| ||| || || ||||| | | | ||| | || || || |||||||| |||||||
Sbjct 363430 ACACTCAGAAGCCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGT 363371
Query 48549 TGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCT 48608
| || || | | || |||| ||||||||||| || || | || || |||||||
Sbjct 363370 TATAGTCCGAGAGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCT 363311
Query 48609 GATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGG 48668
| || ||| | | |||||| ||| ||| ||| ||||| | | ||||| || |
Sbjct 363310 GGTCAGGCGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAG 363251
Query 48669 TAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| ||||| || || || || || || | ||| ||||| |||||||||||
Sbjct 363250 ACGACTCGACCTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 363193
>seq199
Length=104010
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|||||||||||||| || || ||||||||||| | | || ||||||| ||||||
Sbjct 100051 TGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGC 99992
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || | || | |||||||||||| || | || ||||||||| || ||
Sbjct 99991 TTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTG 99932
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | ||||| || | |||||| |||| || ||||| || || ||
Sbjct 99931 GCCTTCACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGCCAGTA 99872
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|| || || || || ||||||||
Sbjct 99871 AGGGTCTTGACGAAGATCTGCAT 99849
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || ||||||||||| ||||||||||| |||| | |||| |||| || |||||
Sbjct 100608 ATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGCTG 100549
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || || | || |||||||| || ||| || | | |||||||||| || ||
Sbjct 100548 CTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 100489
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
| ||| | | | || || || |||| |||||| ||| | || || || || ||
Sbjct 100488 CGCCTTAACGTTGTCG--ATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCT 100431
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || || || || || || |||||
Sbjct 100430 GTCAGGGTCTTGACGAAGATTTGCAT 100405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250039716226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |