Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq143 111 4e-19 seq150 95.1 3e-14 >seq143 Length=661151 Score = 111 bits (122), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 |||||||| ||||| | ||||||||||| || | || ||| || || |||| ||| Sbjct 572956 GGATACTCAAATGGTATTGTTCCCATGCTACGCGCGTATGATGCAACCGCCCGGTATGTC 573015 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| ||||| |||||| || || || ||||| || || ||||| |||| Sbjct 573016 GACCAAGGTGGCAACAAGCGCCCCGGTGCATTCGCTATCTACCTAGAGCCATGGCATGAT 573075 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || || || ||||| ||||| ||||| || ||| || || ||||| | ||||| || Sbjct 573076 GACATCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGTAAGGAGGAGGTTCGTGCTCGC 573135 Query 363934 GATCTGTTCTATGCACTTTGGGTT 363957 || || ||||| ||||||||| || Sbjct 573136 GACCTATTCTACGCACTTTGGATT 573159 Score = 93.3 bits (102), Expect = 1e-13 Identities = 173/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || || ||||| ||| | |||||||||||| | || || ||| || | || | || Sbjct 572598 GAGCGTCCTCAGCACATGCTCATGCGTGTTGCTGTCGGCATTCATGGCTCCGACATCGAG 572657 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACA 363567 | ||| || || || || || | | ||| ||||| ||||| | || ||| Sbjct 572658 CGAGTGATCGAGACCTACAACCTGATGTCTCTCCGTTACTTCACACACGCATCACCCACA 572717 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 ||| ||||||||| || | | || ||| || || ||||| || | |||||| Sbjct 572718 CTGTTCAATGCTGGCACGCCACACCCCCAGCTGAGCTCATGCTTCCTCGTGTGTATGAAG 572777 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 ||||| |||||||||||||| | ||||| || ||||| ||||| | || |||| | Sbjct 572778 GACGACTCCATCGAGGGTATTTACGACACGCTCAAGAACTGTGCCATGATCAGTAAGACT 572837 Query 363688 GCAGGCGGAATTGG 363701 || ||||| || || Sbjct 572838 GCGGGCGGTATCGG 572851 >seq150 Length=1432513 Score = 95.1 bits (104), Expect = 3e-14 Identities = 247/371 (67%), Gaps = 17/371 (5%) Strand=Plus/Minus Query 22294 GAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATAT 22353 ||||| ||||||||||||| | ||||| ||||| || || |||| | || |||||| Sbjct 453532 GAGGCACGATGTTTCTATGGCTTCCAAATAATGATGGAGAACATTCATTCCGAGACATAT 453473 Query 22354 TCTATGATGCTACAGTCACTCGTAGAAGATAAAGACG-AACAACGAAACT---TATTCCG 22409 || | |||| || || |||| | | | || || | ||| || |||| Sbjct 453472 TC---GCTGCT-CATCGACACGTACATCAAGGACCCGCAAGAGCGAGACCGCCTATTTGA 453417 Query 22410 CGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT--- 22466 ||| || || || | | || ||||| ||||| |||||||| || ||||| Sbjct 453416 CGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGGGCTCTCCGCTGGATATC 453357 Query 22467 GAACAATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCAT 22523 | |||| || ||| || || || || || | || || || | || || || || Sbjct 453356 GGACAAG---CGGTCAAGTTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTAT 453300 Query 22524 TTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGG 22583 ||||| || || ||||| ||| || |||||||| || || || | | ||||| || Sbjct 453299 CTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAAGAAGCGCGGGCTCATGCCCGG 453240 Query 22584 TCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || ||||| || || ||| | || | ||| || ||||| | || ||||||||||| || Sbjct 453239 GCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGATTTTGCATG 453180 Query 22644 TATGCTATATC 22654 | |||| |||| Sbjct 453179 TCTGCTCTATC 453169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349825976732