Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq143 111 4e-19
seq150 95.1 3e-14
>seq143
Length=661151
Score = 111 bits (122), Expect = 4e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813
|||||||| ||||| | ||||||||||| || | || ||| || || |||| |||
Sbjct 572956 GGATACTCAAATGGTATTGTTCCCATGCTACGCGCGTATGATGCAACCGCCCGGTATGTC 573015
Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873
||||| ||||| |||||| || || || ||||| || || ||||| ||||
Sbjct 573016 GACCAAGGTGGCAACAAGCGCCCCGGTGCATTCGCTATCTACCTAGAGCCATGGCATGAT 573075
Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933
|| || || ||||| ||||| ||||| || ||| || || ||||| | ||||| ||
Sbjct 573076 GACATCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGTAAGGAGGAGGTTCGTGCTCGC 573135
Query 363934 GATCTGTTCTATGCACTTTGGGTT 363957
|| || ||||| ||||||||| ||
Sbjct 573136 GACCTATTCTACGCACTTTGGATT 573159
Score = 93.3 bits (102), Expect = 1e-13
Identities = 173/254 (68%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| || || ||||| ||| | |||||||||||| | || || ||| || | || | ||
Sbjct 572598 GAGCGTCCTCAGCACATGCTCATGCGTGTTGCTGTCGGCATTCATGGCTCCGACATCGAG 572657
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACA 363567
| ||| || || || || || | | ||| ||||| ||||| | || |||
Sbjct 572658 CGAGTGATCGAGACCTACAACCTGATGTCTCTCCGTTACTTCACACACGCATCACCCACA 572717
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
||| ||||||||| || | | || ||| || || ||||| || | ||||||
Sbjct 572718 CTGTTCAATGCTGGCACGCCACACCCCCAGCTGAGCTCATGCTTCCTCGTGTGTATGAAG 572777
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
||||| |||||||||||||| | ||||| || ||||| ||||| | || |||| |
Sbjct 572778 GACGACTCCATCGAGGGTATTTACGACACGCTCAAGAACTGTGCCATGATCAGTAAGACT 572837
Query 363688 GCAGGCGGAATTGG 363701
|| ||||| || ||
Sbjct 572838 GCGGGCGGTATCGG 572851
>seq150
Length=1432513
Score = 95.1 bits (104), Expect = 3e-14
Identities = 247/371 (67%), Gaps = 17/371 (5%)
Strand=Plus/Minus
Query 22294 GAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATAT 22353
||||| ||||||||||||| | ||||| ||||| || || |||| | || ||||||
Sbjct 453532 GAGGCACGATGTTTCTATGGCTTCCAAATAATGATGGAGAACATTCATTCCGAGACATAT 453473
Query 22354 TCTATGATGCTACAGTCACTCGTAGAAGATAAAGACG-AACAACGAAACT---TATTCCG 22409
|| | |||| || || |||| | | | || || | ||| || ||||
Sbjct 453472 TC---GCTGCT-CATCGACACGTACATCAAGGACCCGCAAGAGCGAGACCGCCTATTTGA 453417
Query 22410 CGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT--- 22466
||| || || || | | || ||||| ||||| |||||||| || |||||
Sbjct 453416 CGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGGGCTCTCCGCTGGATATC 453357
Query 22467 GAACAATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCAT 22523
| |||| || ||| || || || || || | || || || | || || || ||
Sbjct 453356 GGACAAG---CGGTCAAGTTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTAT 453300
Query 22524 TTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGG 22583
||||| || || ||||| ||| || |||||||| || || || | | ||||| ||
Sbjct 453299 CTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAAGAAGCGCGGGCTCATGCCCGG 453240
Query 22584 TCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|| ||||| || || ||| | || | ||| || ||||| | || ||||||||||| ||
Sbjct 453239 GCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGATTTTGCATG 453180
Query 22644 TATGCTATATC 22654
| |||| ||||
Sbjct 453179 TCTGCTCTATC 453169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303349825976732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |