Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-26 seq146 125 7e-24 seq57 122 8e-23 seq199 116 3e-21 seq150 104 2e-17 seq145 91.5 1e-13 >seq1 Length=2270075 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| ||||| | ||| | ||||||||||| || || |||||||| Sbjct 785640 GCCTCCGCGAAGACGAAGCACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGA 785699 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | |||||||||||| ||||| Sbjct 785700 GAGGGTACGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 785759 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || ||||| ||| | | || ||||| | || | || || | ||||||| Sbjct 785760 GATGCCCTCCTTGTC-TTGAATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACTCGA 785818 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| ||| || ||||| ||||| || || || ||||||||| Sbjct 785819 CCTCCAACGTAATGGTCTTCCCGGTGAGAGTCTTCACAAAGATCTGCATG 785868 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| || || || | |||| ||| |||||||| || |||||||||||| | Sbjct 786378 CCGCCACGCAGGCGAAGTACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAC 786437 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| || |||| || |||||||| || || || Sbjct 786438 AGCGTACGACCATCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGATCGGGGGGA 786497 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || |||| ||||||| Sbjct 786498 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCGACC 786557 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || |||||||| Sbjct 786558 TCGAGCGTGATTGTCTTGCCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || || || | ||| | ||||||||||| || |||||||| ||| Sbjct 785868 GCCACCGCGCAGCCGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 785927 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || || || |||||||| || ||| |||| | || ||||| |||||||| Sbjct 785928 CAACGTCCGGCCATCTTCGAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGG 785987 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||| | | || | || || | ||||||| Sbjct 785988 AATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGAC 786047 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| |||||||| Sbjct 786048 TTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 786095 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| |||||||| || ||||||||||| | || | |||||| ||||| Sbjct 785436 ATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCAGCTG 785495 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| | ||| ||||| ||||||||||| || || ||||| || || Sbjct 785496 CTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAATCTT 785555 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | ||| | | || | || || | ||||||| |||| ||| | || || || || Sbjct 785556 CGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGCCAGT 785615 Query 131211 TAGAGTTTTTACGAAAATCTGCATGACT 131238 | ||||| ||||| ||||||||| || Sbjct 785616 CAATGTTTTGACGAAGATCTGCATGCCT 785643 >seq146 Length=609471 Score = 125 bits (138), Expect = 7e-24 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||||| Sbjct 163652 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTG 163711 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| Sbjct 163712 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 163771 Query 131128 AT 131129 || Sbjct 163772 AT 163773 >seq57 Length=802683 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||| | || ||| ||| ||||||||||| || ||| | Sbjct 363106 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTGCTTACCAGCGAA 363047 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| |||||||| |||||||||||||| ||||| ||||| ||| ||| ||| | | Sbjct 363046 GATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTT 362987 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||||| || | ||||| || || || || ||||| || || Sbjct 362986 GTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGAGTCTTGAC 362927 Query 131223 GAAAATCTGCAT 131234 ||| || ||||| Sbjct 362926 GAAGATTTGCAT 362915 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||||||||| | ||||||||| | || | || |||||| |||||||| || || Sbjct 363421 AGCCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCG 363362 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | || || ||| || ||||||||||| ||| |||| || ||||||||||| || | Sbjct 363361 AGAGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCG 363302 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | || ||||| || || || ||| ||||| | || | || || | ||||||| Sbjct 363301 GAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGA 363242 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || | ||| || |||||||||||||| Sbjct 363241 CCTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 363193 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || ||||| || ||| | ||||| |||||| || |||||||| || | Sbjct 362825 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 362766 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | || |||||||| || ||||| || || ||||| || ||| ||||| | Sbjct 362765 GATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 362706 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||| | || |||| || | ||||| ||| || || || || || || || Sbjct 362705 GTCGATGGTATCAGATGATTCGACCTCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTGAC 362646 Query 131223 GAAAATCTGCATG 131235 ||||||||||||| Sbjct 362645 GAAAATCTGCATG 362633 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 ||| || || |||||||||||| | || || |||||||||||||||||| ||| | Sbjct 362548 CTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGCTTGCCAGCGAA 362489 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||| ||||| || || || || ||||| ||| || ||| | | Sbjct 362488 GATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACATT 362429 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||| | |||| || | ||| || || || || || || || Sbjct 362428 GTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCAGTAAGGGTCTTGAC 362369 Query 131223 GAAAATCTGCATG 131235 ||| ||||||||| Sbjct 362368 GAAGATCTGCATG 362356 >seq199 Length=104010 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| || | || ||| ||| || ||||||||||| ||| | Sbjct 100596 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGCTGCTTGCCAGCGAA 100537 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| |||||||| |||||||||||||| ||||| ||||| ||| ||| ||| | | Sbjct 100536 GATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTT 100477 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||||| || | ||||| || || || || || || || || Sbjct 100476 GTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGGGTCTTGAC 100417 Query 131223 GAAAATCTGCAT 131234 ||| || ||||| Sbjct 100416 GAAGATTTGCAT 100405 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||||||||| | ||||||||| | || | || |||||| |||||||| || || Sbjct 100911 AGCCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCG 100852 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | || || || || ||||||||||| ||| |||| | ||||||||||| || | Sbjct 100851 AGAGCGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCG 100792 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | || ||||| ||||| ||| ||| ||||| | || | || || | ||||||| Sbjct 100791 GAATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGA 100732 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || | ||| || |||||||||||||| Sbjct 100731 CTTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 100683 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || ||||| || ||| | ||||| |||||| || |||||||| || | Sbjct 100317 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 100258 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | || |||||||| || ||||| || || ||||| || ||| ||||| | Sbjct 100257 GATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 100198 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||| | ||| |||| || | ||||| ||| || || || || || || || Sbjct 100197 GTCGATGGTATCAGAGGATTCGACCTCCAGGGTAATGGTCTTGCCCGTGAGCGTCTTGAC 100138 Query 131223 GAAAATCTGCATG 131235 ||||||||||||| Sbjct 100137 GAAAATCTGCATG 100125 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 ||| || || |||||||||||| | || || |||||||||||||||||| ||| | Sbjct 100040 CTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGCTTGCCAGCGAA 99981 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||| ||||| || || || || ||||| ||| || ||| | | Sbjct 99980 GATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 99921 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||| | |||| || | ||| || || || || || || || Sbjct 99920 GTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGCCAGTAAGGGTCTTGAC 99861 Query 131223 GAAAATCTGCATG 131235 ||| ||||||||| Sbjct 99860 GAAGATCTGCATG 99848 >seq150 Length=1432513 Score = 104 bits (114), Expect = 2e-17 Identities = 185/263 (70%), Gaps = 9/263 (3%) Strand=Plus/Minus Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 ||| || ||||| | |||||||| || || ||||| |||| || || ||| || Sbjct 453341 TTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTATCTTCTTCTCCGGCTCATT 453282 Query 46206 TGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 ||| ||||| |||| | || || | |||| |||||||||| |||||||| ||||| Sbjct 453281 TGCTGCCATATTTTGGCTTAAGAAGCGCGGGC-TCATGCCCGGGCTGACGTTCTCCAACG 453223 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTAT-AACACT 46323 |||||||| ||||||||||| |||| || || ||||| ||||| |||| | ||| Sbjct 453222 AGCTGATAATCCGCGACGAGGGAATGCACACCGATTTTGCATGTCTGCTCTATCAGCAC- 453164 Query 46324 CGCGTGCACGACAAGCTTGCGCCCG-ACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 | ||| || || | ||| || | | |||||||| ||| ||| || || || Sbjct 453163 --CTGAAACG--GAGATTACATCCGAACGTCATTCTGAGCATCGTCACGGAAGCCGTCGC 453108 Query 46383 CATTGAGAAGGAGTTTTTTACGG 46405 |||||| | |||||| | |||| Sbjct 453107 AATTGAGCAAGAGTTTCTGACGG 453085 >seq145 Length=652196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||||||| | |||||| |||||| ||||||||||| Sbjct 199031 GGTCGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCC 198972 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||| |||| | ||||||||||| || ||||| Sbjct 198971 AGCGAAGATGAGGCGCTGCTGGTCTGGGGGGAT 198939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011466563840