Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq150 201 1e-46 >seq150 Length=1432513 Score = 201 bits (222), Expect = 1e-46 Identities = 376/549 (68%), Gaps = 5/549 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| ||||| || | || ||||| || ||||| ||| ||| ||| || | Sbjct 453180 CATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGC 453239 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||| ||||||||||| | |||||| || || || || Sbjct 453240 CCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAAG 453299 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGCT 93270 ||||| || || || || || ||||| | || || |||||| ||| | | | | | | Sbjct 453300 ATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTCCGAT 453359 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||| | ||||||||| || || ||||| || || |||| ||| ||||| |||| Sbjct 453360 -ATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTC 453418 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||||||| |||||||| | || || ||||| || ||||| | ||| ||||| | Sbjct 453419 AAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGT 453478 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || ||||| | |||||||| |||||||| || |||||||||| || |||| Sbjct 453479 CTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGCAGC 453538 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 |||||||| | || || | ||| || || || || || ||||| |||||||| || || Sbjct 453539 TTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAGGCGGC 453598 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567 || || || | | ||| || || || ||| || || || | | | | ||| Sbjct 453599 GAAGAATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTCGTCGTTGAGGCGATGGTTCCA 453658 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 || | | || | |||||| || | ||||| | ||||| || ||||| || |||| Sbjct 453659 GTCCCAGTGGTCGTGTGAAAGGTCTATCTCTTCCGCTGTCCAGAAAGATGCCTCGGCTTG 453718 Query 93628 TTTGTACAT 93636 |||||||| Sbjct 453719 CTTGTACAT 453727 Score = 152 bits (168), Expect = 6e-32 Identities = 371/559 (66%), Gaps = 5/559 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||| ||||| || | || || || || || | ||| || ||| || | Sbjct 455569 GCAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAG 455510 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| ||||| || ||||| ||||| || || Sbjct 455509 GCCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAA 455450 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGC 93269 ||||| || || || || || ||||| | || || ||||| | | | | | | || Sbjct 455449 GATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGTCAGC 455390 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| | |||||| || || || ||||| || || || | || ||||| || | Sbjct 455389 -GATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCAT 455331 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 ||||||| || |||| | | || ||||| || ||||| | || || ||| Sbjct 455330 CGAATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACG 455271 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || |||| |||||||| ||| ||||| ||||||||||| | || || | Sbjct 455270 TCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCG 455211 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 ||| || || | || || | ||| || || || || ||||| || || ||||| || | Sbjct 455210 CCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCGG 455151 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCC 93566 | || ||||| | | ||| || || ||| ||| | || || | | || | || Sbjct 455150 CGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTCC 455091 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| || || || || || |||| || ||||| ||||| || || || || || | Sbjct 455090 AGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGCCT 455031 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 455030 TCTTGTACATCTGCCAGAT 455012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859226868240