Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq57 120 3e-22 seq199 114 1e-20 seq1 104 2e-17 >seq57 Length=802683 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || |||||||| | | Sbjct 362357 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTCG 362416 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || ||| || || |||||||||||||||||||| ||||| Sbjct 362417 GACACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAG 362476 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| ||||||| || || |||||||||||||| Sbjct 362477 CAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAAC 362536 Query 22399 ATTCAAAAAGA 22409 || || ||||| Sbjct 362537 ATCCAGAAAGA 362547 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || ||||| || ||| | | Sbjct 362634 ATGCAGATTTTCGTCAAGACGCTCACGGGCAAGACCATTACCCTTGAGGTCGAATCATCT 362693 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || |||||||||||||||||||| || || || || Sbjct 362694 GATACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 362753 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||| ||||| || | ||||| |||||| | ||||| || ||| Sbjct 362754 CAACGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTTTCCGACTATAAC 362813 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 362814 ATCCAGAAGGA 362824 >seq199 Length=104010 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || |||||||| | | Sbjct 99849 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCATCG 99908 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || |||||||||||||||||||| ||||| Sbjct 99909 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAG 99968 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| ||||||| || || |||||||||||||| Sbjct 99969 CAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAAC 100028 Query 22399 ATTCAAAAAGA 22409 || || ||||| Sbjct 100029 ATCCAGAAAGA 100039 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || || || || ||| || | Sbjct 100126 ATGCAGATTTTCGTCAAGACGCTCACGGGCAAGACCATTACCCTGGAGGTCGAATCCTCT 100185 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || |||||||||||||||||||| || || || || Sbjct 100186 GATACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 100245 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||| ||||| || | ||||| |||||| | ||||| || ||| Sbjct 100246 CAACGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTTTCCGACTATAAC 100305 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 100306 ATCCAGAAGGA 100316 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| || || || ||| ||||||| ||||| || | | Sbjct 100683 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAAGTCGAGTCGTCT 100742 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| || ||||| || || || Sbjct 100743 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATTCCGCCTGACCAG 100802 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || ||| || || |||| || || ||| Sbjct 100803 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACGCTCTCGGACTATAAC 100862 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 100863 ATTCAGAAGGA 100873 >seq1 Length=2270075 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | || || || ||| |||| || ||||| || | | Sbjct 786095 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACGATCACGCTCGAAGTCGAGTCTTCT 786036 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||||||||| || ||||| Sbjct 786035 GACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAG 785976 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| || || || || ||| | || ||| ||| || | ||||| |||||| Sbjct 785975 CAACGCCTTATCTTCGCTGGGAAGCAGCTCGAAGATGGCCGGACGTTGTCCGACTACAAC 785916 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | ||| | || | || ||||||| || Sbjct 785915 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGGCTGCGCGGTGG 785869 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| || || || || ||| |||| || || || || | | Sbjct 785639 ATGCAGATCTTCGTCAAAACATTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCTTCT 785580 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || |||||||||||||||||||| || || ||||| Sbjct 785579 GACACCATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAG 785520 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || || ||| | ||||| | || | || ||||||||| Sbjct 785519 CAACGTCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGTAGGACGCTTTCGGATTACAAC 785460 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || || || ||| | ||| Sbjct 785459 ATCCAGAAGGAGTCTACCCTTCAT 785436 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || |||| || || || || | | Sbjct 786605 GATGCAGATCTTTGTCAAGACACTCACGGGCAAGACAATCACGCTCGAGGTCGAGTCGTC 786546 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | || || | || || || || ||||||||||||||||| |||||||| Sbjct 786545 CGACACGATTGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCA 786486 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || | || ||||| ||||| ||| | |||||| || || | ||||||||||| Sbjct 786485 GCAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAGGATGGTCGTACGCTGTCCGATTACAA 786426 Query 22398 CATTCAAAAAGAATCCACCATACA 22421 ||| || || || || ||| |||| Sbjct 786425 CATCCAGAAGGAGTCTACCCTACA 786402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || | || | || || || | | Sbjct 785867 ATGCAGATCTTTGTGAAGACTCTCACCGGGAAGACCATTACGTTGGAGGTCGAGTCATCG 785808 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||| ||||||||||||||||| || || || || || Sbjct 785807 GACACGATCGACAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 785748 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| || ||| |||| |||||||| Sbjct 785747 CAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGTCGTACCCTCTCGGATTACAAT 785688 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | ||| | || | || | |||||||| Sbjct 785687 ATCCAGAAGGAGTCGACGTTGCATCTGGTGCTTCGTCTTCGCGGAGG 785641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726843911690