Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq150 120 6e-22 seq144 96.9 7e-15 seq172 93.3 9e-14 >seq150 Length=1432513 Score = 120 bits (132), Expect = 6e-22 Identities = 366/548 (67%), Gaps = 31/548 (6%) Strand=Plus/Minus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| ||||| || || ||||||| |||||| || | ||||| ||||| | || Sbjct 455554 GTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGACC 455495 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| |||||||||| || | |||||| |||||||||||| | | ||||||||| Sbjct 455494 ACGCTTCTTGAGCCAGAATATGGACGCAAA-GGATCCAGAGAAGAAGATACCCTCGACTG 455436 Query 251963 ACACCCATGCAACAAGGCGCTCAGCAAA---CGA---CTTGTCCTGCGA-CAAGAACTTC 252015 | | || || || ||||||||||| ||| ||||| | |||| | || Sbjct 455435 CAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGT-CAGCGATCCAG---CGG 455380 Query 252016 TGTGCCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAG 252075 | ||||| | |||||||| | |||||| || ||||| ||||| || || | | Sbjct 455379 AGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCGAATAG-GTG 455321 Query 252076 TTC-CGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATG 252134 || |||| | ||||| |||| | || | ||||| |||||| |||| || || Sbjct 455320 CTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACGTCTCGGAGTG 455261 Query 252135 GATGGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAG-GGTCGGTGACTT 252193 |||| || | | |||||| | | ||||| ||||| || | | || || | Sbjct 455260 GATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCGCCTGT-ACCT 455202 Query 252194 CCGTGGAAAAGTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGC 252253 | |||| || | ||| |||||| | || ||||| ||| | || ||||| Sbjct 455201 CGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAAG 455142 Query 252254 CAAG--AATGGTCTTGATGAAGTGACGCTCATCGTCGT---TGAGCTTGTCACGCCAGTC 252308 |||| |||| ||||||||| ||||| | ||||| || | |||| |||||| Sbjct 455141 CAAGGACATGG--GAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGT---TCCAGTC 455087 Query 252309 GGCAATGTCCTGATTCAGAGG--AACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTC 252366 | | ||||| | ||||| | || || ||||||||||||| || | | |||||| Sbjct 455086 GTGGAGGTCCT--TGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGCCTTC 455029 Query 252367 TTGTACAT 252374 |||||||| Sbjct 455028 TTGTACAT 455021 Score = 93.3 bits (102), Expect = 9e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || || || ||||| |||||||| || | ||| |||| || ||||| | |||||| Sbjct 455902 TAGTCGGAGACACGCTTCTCGAAGAAGTTGGTCTTCCCCTGGAGCGAGATCATGTCCATG 455843 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 |||||||||||||| | | |||||| ||| || | || || || |||| | |||| Sbjct 455842 AAGTCGAAGGGGTTCGACACGTTGTACACCTTCGGGTCACCGAGCGCGACGAGAAGGCGG 455783 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAA 251724 || || || ||||| | ||||| | ||| ||| | ||||||||| || | | ||| Sbjct 455782 TCGGCAACGAACTCGATGTACTGGCACATGAGTGTCGCGTTCATGCCGATTAGGCCGCAA 455723 Query 251725 GGAA 251728 |||| Sbjct 455722 GGAA 455719 >seq144 Length=659063 Score = 96.9 bits (106), Expect = 7e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 ||||||| ||| | ||||| ||||||||| | |||||||||||||| |||| Sbjct 532271 AGGTCGCCCAGCTCGTCGGTTACGTATCCGAACACGCCCAGTACCATCACGGTGAACAGA 532212 Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776 ||||| || ||||||| | |||| || ||||| || ||||| ||||||||||||| Sbjct 532211 GTCTGATGGCCACCATTGTCAACCTGGCGCAAGACTACGTCGGCAGCAACAACATGAACT 532152 Query 218777 TGCTGCTCCCCAACGGTCAGTTTGGTTCTCG 218807 |||| | || || || || || ||| |||| Sbjct 532151 TGCTTATGCCGAATGGACAATTCGGTACTCG 532121 >seq172 Length=1254375 Score = 93.3 bits (102), Expect = 9e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| | ||||| ||||| || |||| ||||| ||||| ||| Sbjct 1190261 GGTGAGGACCTGTGCAACTGCCAGTTCTCACTCGCCTACGGTGCCAAGATCCTGCTCAAC 1190320 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | ||| | ||||||||||| |||| || ||||| ||||| |||||| | Sbjct 1190321 ACCGCGACTCTCCGCCTCAAGCGTGGCCACCGCTACGGTCTTTGCGGTCGCAATGGTACT 1190380 Query 279465 GGTAAGAGCACTCTAATGCGCGCCAT 279490 || ||| ||||| ||||||||||| Sbjct 1190381 GGAAAGTCGACTCTCATGCGCGCCAT 1190406 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/189 (72%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 280172 TGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGAC 280231 |||| |||| || || ||| | || ||||| || || |||| | || | ||||| Sbjct 1191135 TGTCCTTGGTCCTAACGGTTCCGGCAAGTCGACGCTTGTCAAGCTGCTCATCGGCGACCT 1191194 Query 280232 CCAGGCCA-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGC 280288 || ||| | | || ||| | | |||||||| |||||| || || | ||||||||| Sbjct 1191195 GGAGCCCAACAGGGGCGGTGAGATCTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGC 1191254 Query 280289 TCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCA 280348 |||||||| |||||||||||||| |||||||| |||| ||| || | | ||||| | Sbjct 1191255 ACAGCACGCGTTCCACCACATCGACAACCACCTCGACAAGACCCCGCTCGAGTACATGCT 1191314 Query 280349 GTGGCGCTA 280357 ||||| || Sbjct 1191315 CTGGCGTTA 1191323 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 ||||| ||||| |||||||||||||| || || | || || || || | || || Sbjct 1190665 CTGTCTGGTGGCTGGAAGATGAAGCTTGCTCTTGCGCGTGCGATGCTGTTCAAGGCTGAC 1190724 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 ||||||| || || ||||| || |||||| |||| | || || || ||| | | | Sbjct 1190725 ATCCTACTCCTGGACGAGCCCACGAACCACTTGGATGTCGTTAATGTTGCATGGTTGGAG 1190784 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || || || |||| | ||| |||||||||| |||||||| |||||| Sbjct 1190785 AACTACCTCACGAGCCTCAAGACCTGCACGTCCATCATTGTCTCGCACGACTCCGGCTTC 1190844 Query 279885 CT 279886 || Sbjct 1190845 CT 1190846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833823770066