Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq199 102 7e-17 seq57 96.9 3e-15 >seq1 Length=2270075 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||| | ||| || || || || || |||||||| | |||||| || ||||| || Sbjct 785664 ATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCCTCAAGCTG 785723 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 || |||||| ||||||||||||| ||||| ||||| ||||| || ||||| |||||| Sbjct 785724 CTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGAATCTT 785783 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 | || | | || | ||||| | || ||||| |||| || | || || ||||| Sbjct 785784 TGCCTTGACATTGTCGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTCTTCCCGGT 785843 Query 114359 CAGAGTTTTTACAAAAATCTGCATG 114383 ||||| || ||||| ||||||||| Sbjct 785844 GAGAGTCTTCACAAAGATCTGCATG 785868 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | |||| ||||| || || || |||||||||||| Sbjct 786375 ATACCGCCACGCAGGCGAAGTACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCG 786434 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||| || || || || || || |||| | ||||| || || || Sbjct 786435 GACAGCGTACGACCATCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGATCGGGG 786494 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | |||| ||||||| || ||| Sbjct 786495 GGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCG 786554 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || || || ||||| |||||||| Sbjct 786555 ACCTCGAGCGTGATTGTCTTGCCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||| | ||| || || || || |||||||| ||| || || || |||||| || || Sbjct 785892 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCTTCGAGCTG 785951 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 || |||||| |||| || || || || ||||||||||| || || ||||| |||||| Sbjct 785952 CTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTT 786011 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 || | | || | ||||| | || ||||| || | || | ||| ||||| || Sbjct 786012 CGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTCTTGCCCGT 786071 Query 114359 CAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || |||||||| Sbjct 786072 GAGGGTCTTAACGAAGATCTGCAT 786095 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || ||||||||||| | || | | || || || || || || Sbjct 785443 GTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCAGCTGCTTCCCC 785502 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||||||||| || || |||||||| || || || ||||| |||||| || Sbjct 785503 GCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTC 785562 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || ||||| || | ||| | ||| ||||| |||| ||| Sbjct 785563 ACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAATGTT 785622 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 785623 TTGACGAAGATCTGCATGCCT 785643 >seq199 Length=104010 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||| || || | |||||| |||||| || || || |||||| || Sbjct 100873 TCCTTCTGAATGTTATAGTCCGAGAGCGTACGACCATCTTCCAGCTGCTTGCCAGCGAAG 100814 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||| ||||| || ||||||||||| ||||| ||||| || | | Sbjct 100813 ATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTG 100754 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | || ||||| || | || | ||| ||||| |||| ||| || || Sbjct 100753 TCGATGGTGTCAGACGACTCGACTTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACG 100694 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 100693 AAAATCTGCAT 100683 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| || | || || ||||| || || || |||||| || Sbjct 100595 TCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGCTGCTTGCCAGCGAAG 100536 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | |||||||||||||||||| |||||||| ||||| ||||| || | | Sbjct 100535 ATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTTG 100476 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| || ||||| || | ||| | || || || ||||| || || || Sbjct 100475 TCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGGGTCTTGACG 100416 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 100415 AAGATTTGCAT 100405 >seq57 Length=802683 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||| | || || ||||| || || ||||||||| || Sbjct 363105 TCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTGCTTACCAGCGAAG 363046 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | |||||||||||||||||| |||||||| ||||| ||||| || | | Sbjct 363045 ATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTTG 362986 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| || ||||| || | ||| | || || || |||||||| || || Sbjct 362985 TCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGAGTCTTGACG 362926 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 362925 AAGATTTGCAT 362915 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||| || || | ||||||| ||||| || || || |||||| || Sbjct 363383 TCCTTCTGAATGTTATAGTCCGAGAGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAG 363324 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | ||||| ||||| || ||||||||||| || || |||||| || | | Sbjct 363323 ATCAAGCGCTGCTGGTCAGGCGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTG 363264 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | || ||||| || | || | ||| ||||| |||| ||| || || Sbjct 363263 TCGATGGTGTCAGACGACTCGACCTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACG 363204 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 363203 AAAATCTGCAT 363193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133242792312