Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq150 298 1e-75 >seq150 Length=1432513 Score = 298 bits (330), Expect = 1e-75 Identities = 608/900 (68%), Gaps = 65/900 (7%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| | ||||||||| ||||| Sbjct 455012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACCTC 455071 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCAC---TGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | || || ||||| ||| || Sbjct 455072 TCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACAACGAGCGACACTTCATCTCC 455131 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 | | || || ||||||||||| || |||||||| ||||| |||||||| | | | Sbjct 455132 CATGTCCTTGCTTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGAGCGT 455191 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 ||| || ||||| ||| |||||||||||| ||||||||||||||||| || Sbjct 455192 TTCTCCAACGAGGTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATGATG 455251 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| |||| | || || |||| |||||| ||| || Sbjct 455252 GAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTACATCAAGGACCCTAAG 455311 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | ||||| || || || |||||||||||||||||||||||| Sbjct 455312 CAGCGCGAGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCGGAC 455371 Query 42657 TGGGCGCTCAACTGGATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||| ||| |||||||| || || | | || | ||| | ||||| ||||| Sbjct 455372 TGGGCTCTCCGCTGGATCGCTGACAAGCG-GTCGAGCTTTGCTGAGCGACTGGTGGCCTT 455430 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | || |||||||| ||||||||||| || |||| || ||||| |||||||||||| | Sbjct 455431 CGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTTGCGTCCATATTCTGGCTCAAGAA 455490 Query 42776 G-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 | ||| || |||||||| ||||| ||||||||||| ||||||||| | || ||||| Sbjct 455491 GCGTGGTCTC-ATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGCA 455549 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGG 42894 |||| | || ||||| ||||| || ||| |||||||| | || | ||| | Sbjct 455550 TGCACACCGATTTTGCTTGCCTGCTCTTC---AGCCACCTGAAGCGCCGCCCCCACCCCG 455606 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC----- 42949 | ||| || ||||||||||||||| || | || ||| |||| ||| | || Sbjct 455607 ACGTCGTCAGGCGCATCATCACGGAGGCAGTTGGCATTGAGCAGGAATTCTTGACAGGTA 455666 Query 42950 ---GC--------AGTCGC--TGCCCG-----------TGTC------------------ 42967 || | ||| ||| || |||| Sbjct 455667 CGTGCTCCCTCAAATACGCTTTGCGCGTGGTTAACATTTGTCTCAGATGCCCTTCCTTGC 455726 Query 42968 --CCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024 ||| |||||||||| | |||| ||||||||| |||||||| ||| ||| ||||||| Sbjct 455727 GGCCTAATCGGCATGAA-CGCGACACTCATGTGCCAGTACATCGAGTTCGTTGCCGACCG 455785 Query 43025 TCTCCTGTGCCAGATGGGTCTCAGCCG--CCTCTACAACACGCCGTGCCCCTTCGACTTT 43082 || || | | | || | | ||| | |||||| | || |||||||||||| Sbjct 455786 CCTTCTCGTCGCGCTCGG--TGACCCGAAGGTGTACAACGTGTCGAACCCCTTCGACTTC 455843 Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| | |||||| | |||| ||||||||||| ||||||||||| ||| |||||||| Sbjct 455844 ATGGACATGATCTCGCTCCAGGGGAAGACCAACTTCTTCGAGAAGCGTGTCTCCGACTAC 455903 Score = 194 bits (214), Expect = 3e-44 Identities = 310/441 (70%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || |||||||||||||| || |||||||| || |||||||| | | | ||| | Sbjct 453610 CTCGCATTCTTCGCCGCCTCCGATGGCATAGTGAACGAGAACCTTGTCGAGCGCTTCTCG 453551 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || ||||| ||||| || || ||||| |||||||| ||| || |||||| Sbjct 453550 AATGAAGTGCAAGCTGCGGAGGCACGATGTTTCTATGGCTTCCAAATAATGATGGAGAAC 453491 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAG 42599 | || || ||| || | ||||||| ||||||||||| ||| || ||| Sbjct 453490 ATTCATTCCGAGACATATTCG---CTGCTCATCGACACGTACATCAAGGACCCGCAAGAG 453434 Query 42600 CGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGG 42659 || || | || || | ||||| ||||| || || |||||||||||||||||||| ||| Sbjct 453433 CGAGACCGCCTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGG 453374 Query 42660 GCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGC-GAGAGGCTGGTAGCCTTTAC 42718 || ||| |||||| | | | | | | ||| || ||| | || || ||||| | Sbjct 453373 GCTCTCCGCTGGATATCG-GACAAGCGGTCAAGTTTTGCTGAGCGACTAGTGGCCTTCGC 453315 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 ||| |||||||| ||||||||||| ||| | || || |||| || ||||| ||| || Sbjct 453314 CGCAGTCGAGGGTATCTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAAGAAGCG 453255 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | | |||||||| || || ||||| ||||| || || | | | |||||||| |||| Sbjct 453254 CGGGCTCATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCA 453195 Query 42839 TAGGGACTTTGCCTGCCTCCT 42859 | || ||||| || || || Sbjct 453194 CACCGATTTTGCATGTCTGCT 453174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336532241760