Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=2270075 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 33922 AGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAAT 33981 || ||||||||| ||||||||| |||||||| || | || || |||| ||||| Sbjct 786171 AGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCAAC 786230 Query 33982 TGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATT 34041 |||||||| ||||| |||||||||||||||||| || | || ||| || ||| ||| Sbjct 786231 TGCTTGCCTGCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAATC 786290 Query 34042 TTTTGCTTAA 34051 || ||||| Sbjct 786291 TTAGCCTTAA 786300 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | |||||| || || ||||||||||| ||||||||| |||||||| || | | Sbjct 785869 CCACCGCGCAGCCGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 785928 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || | || || | ||||| || || || || ||||| ||||||||| || Sbjct 785929 AACGTCCGGCCATCTTCGAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGA 785988 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | | ||| |||||| ||| || ||| | | | | |||| ||| ||| | Sbjct 785989 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACT 786048 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 |||| ||| || || || || || || || || || ||||| |||||| Sbjct 786049 TCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATT 786096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061306341252