Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq57 159 8e-34 seq199 154 3e-32 seq1 138 3e-27 seq150 98.7 2e-15 seq144 91.5 3e-13 >seq57 Length=802683 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||| | |||||| || || ||||| || ||||||| |||||| || |||||||||| Sbjct 363122 CGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTA 363063 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || |||||||||| ||||||||| ||||| ||||| || ||||||| Sbjct 363062 GCTGCTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGA 363003 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| || ||||| || || | ||| || || || || || || || ||||| | Sbjct 363002 TCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTC 362943 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||||||||||||||| || ||||| Sbjct 362942 CTGTCAGAGTCTTGACGAAGATTTGCAT 362915 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| |||| ||||| ||||| ||||| || || |||| |||||| |||||||| |||| Sbjct 362564 CGAGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTA 362505 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || |||||||| || ||||| ||| ||| || || || || ||||||| Sbjct 362504 GCTGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGA 362445 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || ||||| || || || | || || || |||||||||||||| ||||| | Sbjct 362444 TCTTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGC 362385 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||||||||| |||||||| Sbjct 362384 CAGTAAGGGTCTTGACGAAGATCTGCAT 362357 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | || || || || || || |||||||| | | Sbjct 363419 CCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAG 363360 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || |||||||||| ||||| || | || Sbjct 363359 AGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGA 363300 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||| || ||||| || || || || || | || ||| || || Sbjct 363299 ATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACC 363240 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||||||||| || |||| |||||| ||||| ||||||||| Sbjct 363239 TCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCATT 363192 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| |||| ||||| || || ||||| |||||||||| |||||||| ||||| || | Sbjct 362840 CGAGGTGAAG-GTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGA 362782 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 ||| || || || |||||||| || || || | ||||| || || || || || | Sbjct 362781 GTTGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAA 362722 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| || ||||| || || | ||| ||||| || || || || || ||||| | Sbjct 362721 TCTTCGCCTTGACGTTGTCGATGGTATCAGATGATTCGACCTCAAGGGTAATGGTCTTGC 362662 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||||||||| |||||||| Sbjct 362661 CCGTGAGCGTCTTGACGAAAATCTGCAT 362634 >seq199 Length=104010 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | || || || || || || |||||||| | | Sbjct 100909 CCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAG 100850 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || ||||| | || || || ||||||||||| ||||| || | || Sbjct 100849 AGCGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGA 100790 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| ||||| || ||||| || || | || ||| || ||| Sbjct 100789 ATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACT 100730 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||||||||| || |||| |||||| ||||| ||||||||| Sbjct 100729 TCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCATT 100682 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 || |||| ||||| ||||| ||||| || || |||| |||||| |||||||| |||| Sbjct 100054 AGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGC 99995 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||| || ||||| ||| ||| || || || || |||||||| Sbjct 99994 TGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATC 99935 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || ||||| || || || | || || || |||||||||||||| ||||| || Sbjct 99934 TTGGCCTTCACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGCCA 99875 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| |||||||| Sbjct 99874 GTAAGGGTCTTGACGAAGATCTGCAT 99849 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||| | |||||| || || || || || ||||| | |||||| || |||||||| | Sbjct 100610 AGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGC 100551 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||||| ||||||||| ||||| ||||| || |||||||| Sbjct 100550 TGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC 100491 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || ||||| || || | ||| || || || || || || || ||||| || Sbjct 100490 TTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCT 100431 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || ||||| Sbjct 100430 GTCAGGGTCTTGACGAAGATTTGCAT 100405 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 || |||| |||||| || || ||||| |||||||||| |||||||| ||||| || | | Sbjct 100331 AGGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGT 100272 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || |||||||| || || || | ||||| || || || || || || Sbjct 100271 TGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATC 100212 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || ||||| || || | ||| ||||| || || || || || ||||| || Sbjct 100211 TTCGCCTTGACGTTGTCGATGGTATCAGAGGATTCGACCTCCAGGGTAATGGTCTTGCCC 100152 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| |||||||| Sbjct 100151 GTGAGCGTCTTGACGAAAATCTGCAT 100126 >seq1 Length=2270075 Score = 138 bits (152), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || |||||||||| ||| || || ||||| || |||| Sbjct 785865 CATG-CCACCGCGCAGCCGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGT 785923 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||| || || ||||| | || || || |||||||| || || || ||| Sbjct 785924 CGGACAACGTCCGGCCATCTTCGAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCG 785983 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || || || || ||||| || ||||| |||||||| || || | || || | Sbjct 785984 GAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACT 786043 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | |||||||||||||||||||| || || || ||||| ||||| ||||||||| Sbjct 786044 CGACTTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATT 786096 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||||||||| || | || || || ||||| || || |||| Sbjct 786378 CCGCCACGCAGGCGAAGTACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAC 786437 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || || ||||||| ||||| ||| || ||| Sbjct 786438 AGCGTACGACCATCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGA---TCGGGG 786494 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||||| ||||| || || || | ||| ||| || Sbjct 786495 GGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCG 786554 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| ||||| || || || |||||||| || |||||||| Sbjct 786555 ACCTCGAGCGTGATTGTCTTGCCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| |||| |||| || || ||||| || ||||| | ||||| || |||||||| | Sbjct 786169 CGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCA 786228 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 | || || ||||| || ||||| ||||| ||| ||||| || || |||||||| | Sbjct 786229 ACTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAA 786288 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCT 288442 | || || || || || || || | || |||| || || || || ||||| |||| Sbjct 786289 TCTTAGCCTTAACATTGTCGATTGTGTCAGAGCTC---TCGACCTCCAGAGTGATAGTCT 786345 Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||||||||| || |||||||| Sbjct 786346 TTCCCGTGAGAGTCTTGACAAAGATCTGCAT 786376 Score = 109 bits (120), Expect = 1e-18 Identities = 164/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| || ||||| | ||| || || |||||||| || | Sbjct 785637 CATG-CCTCCGCGAAGACGAAGCACCAGATGCAACGTCGACTCCTTCTGGATATTGTAAT 785695 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| || || ||||| || | || || || |||||||| |||||||| || | Sbjct 785696 CCGAGAGGGTACGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAG 785755 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || || || || || || || || || || || | || || | Sbjct 785756 GAGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACT 785815 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||| || ||||||||||| |||||||| || || |||||||| Sbjct 785816 CGACCTCCAACGTAATGGTCTTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 785867 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||||| | ||||| || | || || || || ||| Sbjct 785449 TCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCAGCTGCTTCCCCGCAAAG 785508 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || ||| ||||| || || || || || || ||||| |||||||| Sbjct 785509 ATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTG 785568 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||||||||| || |||| || |||||| Sbjct 785569 TCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAATGTTTTGACG 785628 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 785629 AAGATCTGCAT 785639 >seq150 Length=1432513 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| || |||||| || || ||||| ||||| || || || |||| Sbjct 455733 ATCGGCATGAACGCGACACTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGC--CTTC 455790 Query 269212 ACG--GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 || || |||||| | ||| |||||||| | ||| ||||||| ||| ||||| Sbjct 455791 TCGTCGCGCTCGGTGACCCGAAGGTGTACAACGTGTCGAACCCCTTCGACTTCATGGACA 455850 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 | || |||||| | || ||||| ||||||||||| ||||||||| |||||| Sbjct 455851 TGATCTCGCTCCAGGGGAAGACCAACTTCTTCGAGAAGCGTGTCTCCGACTA 455902 >seq144 Length=659063 Score = 91.5 bits (100), Expect = 3e-13 Identities = 175/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 326078 TCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG 326137 || ||||| | ||| | | || ||||||||| || ||||| ||||| | || | Sbjct 533118 TCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTTG 533177 Query 326138 GTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGC 326196 || | ||| || || | |||| | ||| ||| ||||| |||||| |||| || Sbjct 533178 TGCTGCAAGCCAAGGATCTTCTTGATGTTCTG-GATCTCTTCATTCTTCATGAT-CTGCT 533235 Query 326197 CACGGAT-GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCT 326255 | | | || ||||||||||||| ||| |||||||| ||||||||||| || | | | Sbjct 533236 CGTGCTTAGCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTGT 533295 Query 326256 CGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCA 326315 |||||||||| ||| || || |||| || || | | ||||| || || || || | Sbjct 533296 CGCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTGA 533355 Query 326316 GAATGAGAGTGCA 326328 | || || ||||| Sbjct 533356 GGATCAGCGTGCA 533368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650984163228