Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq150 141 2e-28 seq144 86.0 1e-11 >seq150 Length=1432513 Score = 141 bits (156), Expect = 2e-28 Identities = 137/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 243551 TTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAG 243610 |||| ||| | || || ||||||||| | ||||||| | ||||||||||| ||||| | Sbjct 455719 TTCCTTGCGGCCTAATCGGCATGAACGCGACACTCATGTGCCAGTACATCGAGTTCGTTG 455778 Query 243611 CCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTG 243670 |||||||| || || ||||||| ||| | ||| ||||||||| ||||||||| | Sbjct 455779 CCGACCGCCTTCTCGTCGCGCTCGGTGACCCGAAGGTGTACAACGTGTCGAACCCCTTCG 455838 Query 243671 CCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 ||| ||||| | || ||||| || ||||| || ||||||||||| ||||||||| Sbjct 455839 ACTTCATGGACATGATCTCGCTCCAGGGGAAGACCAACTTCTTCGAGAAGCGTGTC 455894 >seq144 Length=659063 Score = 86.0 bits (94), Expect = 1e-11 Identities = 174/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 298199 TCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG 298258 || ||||| | ||| | | || ||||||||| || ||||| ||||| | || | Sbjct 533118 TCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTTG 533177 Query 298259 GTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGC 298317 || | ||| || || | |||| | ||| ||| ||||| |||||| |||| || Sbjct 533178 TGCTGCAAGCCAAGGATCTTCTTGATGTTCTG-GATCTCTTCATTCTTCATGAT-CTGCT 533235 Query 298318 CACGGAT-GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCT 298376 | | | || |||||||| |||| ||| |||||||| ||||||||||| || | | | Sbjct 533236 CGTGCTTAGCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTGT 533295 Query 298377 CGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCA 298436 |||||||||| ||| || || |||| || || | | ||||| || || || || | Sbjct 533296 CGCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTGA 533355 Query 298437 GAATGAGAGTGCA 298449 | || || ||||| Sbjct 533356 GGATCAGCGTGCA 533368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876806473100