Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq143 98.7 1e-15 >seq143 Length=661151 Score = 98.7 bits (108), Expect = 1e-15 Identities = 211/311 (68%), Gaps = 21/311 (7%) Strand=Plus/Plus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 ||||||||||||||| || ||||||| |||||| || ||||| ||||| ||||| Sbjct 573496 GCCAAGTCCAACCAGAAGAACCTCGGTACCATCAAGTCGTCCAATCTCTGCACAGAGATC 573555 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCC 94647 || ||||| | || || || || | ||||| || ||||||| ||||||| |||| | Sbjct 573556 GTTGAGTACTCGTCGCCTGAAGAAACCGCTGTCTGCAACCTGGCCTCCATCTCCCTGCCA 573615 Query 94648 ACTTTCGTGCGAG-ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAA 94706 ||||| | |||| ||| ||||||| |||| | ||| | || || ||| Sbjct 573616 TCTTTCAT-CGAGAATG-----GCGTCTACAACTTC-CAGAAGCTGCACGATATTACGAA 573668 Query 94707 CTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGT 94766 ||| | ||| ||||||||| | | || || | |||| ||||||| | Sbjct 573669 GGTCG---------TCACCTTCAACCTGAACCGTATCATTGATATCAACTACTACCCCAT 573719 Query 94767 CCCGGAGG--CGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGT 94824 ||| |||| || || || ||| || || || || ||||| ||||| || ||||| Sbjct 573720 CCCCGAGGCTCGTCGA--TCCAACATGCGCCACCGTCCGATCGGTATCGGTGTGCAGGGC 573777 Query 94825 TTCGCGGACGC 94835 |||| ||||| Sbjct 573778 CTCGCCGACGC 573788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721802406960