Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq150 136 5e-27 seq144 104 3e-17 >seq150 Length=1432513 Score = 136 bits (150), Expect = 5e-27 Identities = 349/524 (67%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | ||||| |||||| |||||| || |||||||| || || Sbjct 455566 AGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCC 455507 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | ||| || |||||||||||||| Sbjct 455506 GGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAGAT 455447 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATC 127695 ||||| || ||||| || | || ||||| |||||| || || ||| | | Sbjct 455446 ACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCG---CTTGTCAGC 455390 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755 | ||| | ||||| | ||||| |||| ||| || |||| ||| | ||| || || Sbjct 455389 GATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATC 455330 Query 127756 AAAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 127814 || || | || | | || | || || |||||||| | || ||||| || || | Sbjct 455329 GAATAGGTGCTCGCGCTGCTTA-GGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACG 455271 Query 127815 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 127873 | ||| ||||| | | ||| || ||| | |||||||| ||||||| || Sbjct 455270 TCTCGGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCC 455212 Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 ||||||||| | || ||| | | ||||| || || || ||||| | Sbjct 455211 GCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCG 455152 Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 127990 || || || || |||| || ||||| | | || || ||||||| || | ||| Sbjct 455151 GCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTC 455092 Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| ||| ||||| ||||| || | |||||| | ||||| Sbjct 455091 CAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCA 455048 Score = 105 bits (116), Expect = 8e-18 Identities = 209/304 (69%), Gaps = 8/304 (3%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| ||| || || || || ||||| ||| || Sbjct 453183 GCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGCCCG 453242 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | ||| || || ||| ||||||||| ||||||||||| Sbjct 453243 GGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAAGATA 453302 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGAC--TTTGTATCA- 127696 ||||| || ||||| || | ||| ||||| |||| | | ||| |||| | Sbjct 453303 CCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAA---AACTTGACCGCTTGTCCGAT 453359 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| | ||||| | ||||| |||| ||| || || | |||| ||| || ||| Sbjct 453360 ATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTCA 453419 Query 127757 AAGAGTTCCTTCT-TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 || || | ||| ||| || || ||||||||| | || ||||| |||||||| Sbjct 453420 AATAG-GCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGT 453478 Query 127816 TTCG 127819 ||| Sbjct 453479 CTCG 453482 >seq144 Length=659063 Score = 104 bits (114), Expect = 3e-17 Identities = 207/306 (68%), Gaps = 12/306 (4%) Strand=Plus/Plus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 176730 ||||||||| | ||||||||| ||||| |||||| ||| || | || ||||| Sbjct 533117 ATCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTT 533176 Query 176731 TTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGC 176790 || || | || | |||||||||| | | || ||||| || ||| ||| | Sbjct 533177 GTGCTGCAAGCCAAGGATCTTCTTGATGTTCTGGATCTCTTCATTCTTCATGATCTGCTC 533236 Query 176791 CACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATC 176850 |||||||||||| || ||| || || ||||||||||| ||| | | || Sbjct 533237 GTGCTTAGCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTGTC 533296 Query 176851 ACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCAC 176910 ||||| || || ||||||||| || ||||| | ||| ||||| || || || || | Sbjct 533297 GCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTGAG 533356 Query 176911 GATGAGCGTACACTTTCCAGATTGTGCC------GTCCCCGCCTTGTTCGCATCGTCCAA 176964 ||| ||||| || |||| |||||| ||||| || ||||| || ||| ||| Sbjct 533357 GATCAGCGTGCA--TTCC----TGTGCCTTCCGGGTCCCAGCGTTGTTAGCGTCGGACAA 533410 Query 176965 CTTGGG 176970 |||||| Sbjct 533411 CTTGGG 533416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505466842160