Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq150 136 5e-27
seq144 104 3e-17
>seq150
Length=1432513
Score = 136 bits (150), Expect = 5e-27
Identities = 349/524 (67%), Gaps = 13/524 (2%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | ||||| |||||| |||||| || |||||||| || ||
Sbjct 455566 AGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCC 455507
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| |||||||| | |||||| || | ||| || ||||||||||||||
Sbjct 455506 GGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAGAT 455447
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATC 127695
||||| || ||||| || | || ||||| |||||| || || ||| | |
Sbjct 455446 ACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCG---CTTGTCAGC 455390
Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755
| ||| | ||||| | ||||| |||| ||| || |||| ||| | ||| || ||
Sbjct 455389 GATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATC 455330
Query 127756 AAAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 127814
|| || | || | | || | || || |||||||| | || ||||| || || |
Sbjct 455329 GAATAGGTGCTCGCGCTGCTTA-GGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACG 455271
Query 127815 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 127873
| ||| ||||| | | ||| || ||| | |||||||| ||||||| ||
Sbjct 455270 TCTCGGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCC 455212
Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933
||||||||| | || ||| | | ||||| || || || ||||| |
Sbjct 455211 GCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCG 455152
Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 127990
|| || || || |||| || ||||| | | || || ||||||| || | |||
Sbjct 455151 GCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTC 455092
Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||||| ||| ||||| ||||| || | |||||| | |||||
Sbjct 455091 CAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCA 455048
Score = 105 bits (116), Expect = 8e-18
Identities = 209/304 (69%), Gaps = 8/304 (3%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | |||||||| ||| || || || || ||||| ||| ||
Sbjct 453183 GCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGCCCG 453242
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
|||||||| || |||||||| | ||| || || ||| ||||||||| |||||||||||
Sbjct 453243 GGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAAGATA 453302
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGAC--TTTGTATCA- 127696
||||| || ||||| || | ||| ||||| |||| | | ||| |||| |
Sbjct 453303 CCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAA---AACTTGACCGCTTGTCCGAT 453359
Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756
| ||| | ||||| | ||||| |||| ||| || || | |||| ||| || |||
Sbjct 453360 ATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTCA 453419
Query 127757 AAGAGTTCCTTCT-TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815
|| || | ||| ||| || || ||||||||| | || ||||| ||||||||
Sbjct 453420 AATAG-GCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGT 453478
Query 127816 TTCG 127819
|||
Sbjct 453479 CTCG 453482
>seq144
Length=659063
Score = 104 bits (114), Expect = 3e-17
Identities = 207/306 (68%), Gaps = 12/306 (4%)
Strand=Plus/Plus
Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 176730
||||||||| | ||||||||| ||||| |||||| ||| || | || |||||
Sbjct 533117 ATCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTT 533176
Query 176731 TTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGC 176790
|| || | || | |||||||||| | | || ||||| || ||| ||| |
Sbjct 533177 GTGCTGCAAGCCAAGGATCTTCTTGATGTTCTGGATCTCTTCATTCTTCATGATCTGCTC 533236
Query 176791 CACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATC 176850
|||||||||||| || ||| || || ||||||||||| ||| | | ||
Sbjct 533237 GTGCTTAGCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTGTC 533296
Query 176851 ACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCAC 176910
||||| || || ||||||||| || ||||| | ||| ||||| || || || || |
Sbjct 533297 GCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTGAG 533356
Query 176911 GATGAGCGTACACTTTCCAGATTGTGCC------GTCCCCGCCTTGTTCGCATCGTCCAA 176964
||| ||||| || |||| |||||| ||||| || ||||| || ||| |||
Sbjct 533357 GATCAGCGTGCA--TTCC----TGTGCCTTCCGGGTCCCAGCGTTGTTAGCGTCGGACAA 533410
Query 176965 CTTGGG 176970
||||||
Sbjct 533411 CTTGGG 533416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505466842160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |