Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq143 104 4e-17 >seq143 Length=661151 Score = 104 bits (114), Expect = 4e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 |||| ||| || |||||||| || || | | || || | | | | ||| ||||||||| Sbjct 574573 GTCTGGTCGACGGTGAACTGGATAGCCTGTGCAGCGGGGCGGGTGCGCAGGTAGTACATG 574514 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTC-ACGTT 203955 || ||||| |||||||||| ||||||||| | ||||||| | || | || | ||| Sbjct 574513 CCTGTCTTGAGGCCCTTCTTCCACCCGTAGAAGTGCATGCTCGTCAACTGGCCCGTCGTC 574454 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 || | | | || ||| | || || ||| || ||||| ||||| | | | || || || Sbjct 574453 GGCGACTG-CAGGTGCACATTGAGGCTCTGACTCTGGTCAATGAACGCCCCACGGTCGGC 574395 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||| | || ||| |||| || |||||||| ||||||||| Sbjct 574394 AGCCATGTCGAGAATTTTCTTTTGGCTGATCTCCCAGACCGTCTTG 574349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152953686560