Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 152 1e-31 seq199 127 5e-24 seq57 127 5e-24 seq145 93.3 1e-13 seq146 84.2 5e-11 >seq1 Length=2270075 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || ||||||||||| |||| ||||||||| | ||| |||| |||||| Sbjct 785884 AGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCT 785943 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || || ||||| |||||| ||| || || ||| Sbjct 785944 TCGAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCC 786003 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | || || || | |||||||||| Sbjct 786004 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTC 786063 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 786064 TTGCCCGTGAGGGTCTTAACGAAGATCTG 786092 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || | ||||||||||| |||| ||||| || | | || Sbjct 785647 CGAAGACGAAGCACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTA 785706 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||||||||||||||| ||| || || Sbjct 785707 CGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCC 785766 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| ||| || |||| ||||| | || || || |||||| Sbjct 785767 TCCTTGTCTTGAATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACTCGACCTCCAAC 785826 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || |||||||| |||||||| || || Sbjct 785827 GTAATGGTCTTCCCGGTGAGAGTCTTCACAAAGATCTG 785864 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| || || |||||||| |||| ||||||||||| || || | || ||||||| | Sbjct 786171 AGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCAAC 786230 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || || || || |||||||| |||||| || || || ||||||||| Sbjct 786231 TGCTTGCCTGCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAATC 786290 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| || |||| ||||| | | || || |||| ||||| ||||| ||| Sbjct 786291 TTAGCCTTAACATTGTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATAGTCTTTCCC 786350 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| || || Sbjct 786351 GTGAGAGTCTTGACAAAGATCTG 786373 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || |||||||| |||| |||||| || | | ||||| || || |||| Sbjct 785432 CAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCA 785491 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || || ||||||||||| ||||| |||||| || || || || |||| Sbjct 785492 GCTGCTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAA 785551 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||||||| |||| |||||| | | || || || | ||||||||||| | Sbjct 785552 TCTTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGC 785611 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | ||||| || || || || Sbjct 785612 CAGTCAATGTTTTGACGAAGATCTG 785636 >seq199 Length=104010 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||||||||| |||||| || | ||| ||||| | | || Sbjct 100903 CGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGCGTA 100844 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || |||||||| || ||||||||||| || ||| ||| Sbjct 100843 CGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCT 100784 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| |||||| | | || || || | Sbjct 100783 TCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACTTCGAGA 100724 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| | ||| ||||| ||||| || Sbjct 100723 GTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTG 100686 Score = 96.9 bits (106), Expect = 8e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| ||||| |||||| |||| ||||||||||| | ||| | |||||||| ||| Sbjct 99770 AGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCGAGC 99711 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||||| |||||||||||||| || |||||||| ||| Sbjct 99710 TGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCGGGA 99675 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || |||||| || | ||||||||||| | || | || ||||| | Sbjct 100612 CAAGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGA 100553 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || |||||||| | |||||| ||||||||| || ||||| ||||| | Sbjct 100552 GCTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGA 100493 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| ||||| | | || || || | || || ||||| | Sbjct 100492 TCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTC 100433 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || || ||||| Sbjct 100432 CTGTCAGGGTCTTGACGAAGATTTG 100408 >seq57 Length=802683 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||||||||| |||||| || | ||| ||||| | | ||| Sbjct 363413 CGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGAGTA 363354 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||||||||| || |||||||| | ||||||||||| || ||| ||| Sbjct 363353 CGACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCT 363294 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| |||||| | | || || || | Sbjct 363293 TCCTTATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGA 363234 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| | ||| ||||| ||||| || Sbjct 363233 GTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTG 363196 Score = 96.9 bits (106), Expect = 8e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| ||||| |||||| |||| ||||||||||| | ||| | |||||||| ||| Sbjct 362278 AGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCGAGC 362219 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||||| |||||||||||||| || |||||||| ||| Sbjct 362218 TGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCGGGA 362183 >seq145 Length=652196 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| || || | || | || || Sbjct 199045 AGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCC 198986 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || ||||||||||| ||||||||||| || Sbjct 198985 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGG 198945 >seq146 Length=609471 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| || | ||||||||| | || | ||| || Sbjct 163667 AGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGTCCGTCC 163726 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || |||||||| || |||||||||||||| Sbjct 163727 TCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCCGG 163767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918186285142