Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq150 131 2e-25 seq143 107 2e-18 >seq150 Length=1432513 Score = 131 bits (144), Expect = 2e-25 Identities = 183/251 (73%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| || || || |||||| | || | || || || | ||||| ||||| |||||| Sbjct 455319 AGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCGGACTGGGCTC 455378 Query 102145 TGAAGTGGTTTGAT-ACAAA--GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | ||| | | | |||| |||| | ||||||||||||||| | || || || Sbjct 455379 TCCGCTGGATCGCTGACAAGCGGTCGAG---CTTTGCTGAGCGACTGGTGGCCTTCGCTG 455435 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 102260 || |||||||||||||||||||| ||||| |||| | || | |||||||||||||| Sbjct 455436 CAGTCGAGGGTATCTTCTTCTCTGGATCCTT-TGCGTCCATATTCTGGCTCAAGAAGCGT 455494 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||||||| || ||| ||||| |||||||| ||| ||||| ||||| | ||| Sbjct 455495 GGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGCATGCAC 455554 Query 102321 CAAGAGTTTGC 102331 || ||||| Sbjct 455555 ACCGATTTTGC 455565 Score = 118 bits (130), Expect = 1e-21 Identities = 177/246 (72%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 || ||||| |||||| | ||| | || || || | ||||| |||||||||||| | Sbjct 453424 CTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGGGCTCTCCGC 453365 Query 102150 TGGTT-TGATACAAA--GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | | |||| ||| ||| ||||||||||||| | || || || || Sbjct 453364 TGGATATCGGACAAGCGGTCAAGTT---TTGCTGAGCGACTAGTGGCCTTCGCCGCAGTC 453308 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCT 102265 ||||||||||||||||| || || || ||| || || | |||||| |||||||| || || Sbjct 453307 GAGGGTATCTTCTTCTCCGGCTCATT-TGCTGCCATATTTTGGCTTAAGAAGCGCGGGCT 453249 Query 102266 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 102325 |||||| || || |||||||||||||| || || ||||||||| | ||| || Sbjct 453248 CATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGA 453189 Query 102326 GTTTGC 102331 ||||| Sbjct 453188 TTTTGC 453183 >seq143 Length=661151 Score = 107 bits (118), Expect = 2e-18 Identities = 163/229 (71%), Gaps = 11/229 (5%) Strand=Plus/Plus Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||| ||||| || | ||| |||||||| |||| ||||| |||| | | | || || || Sbjct 572946 AGGGACAAACGGATACTCAAATGGTATTGTTCCCATGCTACGCGCGTATGATGCAACCGC 573005 Query 111962 GCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGA 112015 || ||||| |||||| ||| ||| | | | || |||| |||| || || Sbjct 573006 CCGGTATGTCGACCAAGGTGGCAACAAGCGCCCCGGTGCAT---TCGCTATCTACCTAGA 573062 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 ||||||||| | || ||| | ||||||||||| | || ||||| ||| | ||||| Sbjct 573063 GCCATGGCATGATGACATCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGTAAGGAGGA 573122 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 || | |||| ||||| || |||| ||| || |||||||| |||||||| Sbjct 573123 GGTTC-GTGCTCGCGACCTATTCTACGCACTTTGGATTCCCGATCTCTT 573170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740646402720