Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq150 104 3e-17 seq1 102 1e-16 >seq150 Length=1432513 Score = 104 bits (114), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||| || ||| || || |||||||| || | ||| Sbjct 455547 CCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGACCACGCTTC 455488 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| || |||| ||| |||||| |||||||| ||||| || ||||| Sbjct 455487 TTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAGATACCCTCGACTGCAGCGAAG 455428 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGT---CGAACCACTTGAGAGCCCAGTT 119689 || | || |||||||| |||| |||| ||||| ||| ||| ||||||||||| Sbjct 455427 GCCACCAGTCGCTCAGC-AAAGCTCGACCGCTTGTCAGCGATCCAGCGGAGAGCCCAGTC 455369 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCT 119739 ||||| || |||||||||| || | |||||| ||||| || |||| Sbjct 455368 CGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCGAATAGGTGCT 455319 >seq1 Length=2270075 Score = 102 bits (112), Expect = 1e-16 Identities = 332/511 (65%), Gaps = 31/511 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| ||||| || || | || ||| ||||| | || | | ||| ||| || Sbjct 1857937 CGGTCGAATCGACCAGGACGCATCAGTGCAGGGTCAAGGACGTCTGCCCTGTTGGTACCG 1857878 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || || ||| ||||| || ||| |||||||| || ||| || ||| Sbjct 1857877 GCGAGCACGACGATGTG---CTCATGCGTGCTGAAGCCGTCCATCTCCACGAGCAGTTGG 1857821 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC---TGCCGAACGCTTCTTA 11676 |||| ||| | || |||||||| ||| | | || || | ||| ||| Sbjct 1857820 TTGAGCGTGTTCTCCCGCTCATCATTGCCGCCAAGTGAACGCTTTGACCCACGAGCCTTG 1857761 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| |||||| || || || ||||| ||||| || ||| | | | | |||| Sbjct 1857760 CCGATAGCGTCGATTTCGTCAATGAAGACGAT--------GGCCGGCGCATTCTTCTTCG 1857709 Query 11737 --------AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 || || ||||| || ||| | || ||||| ||||||||||| ||||| | Sbjct 1857708 CAGTCGCAAAGAGGTCACGAACTCGCGATGAACCGACACCAACGAACATCTCGACGAATT 1857649 Query 11789 TTGCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847 | |||| ||| ||| ||||| || || | ||| || || | || || ||| Sbjct 1857648 CGGAACCAGATACAGAGAAA-AAGGGGACGTTCGCCTCGCCCGCTGTCGCCTTCGCCAGG 1857590 Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC- 11906 || ||||||||||||||||| | |||| | | |||||| || |||||||| ||||| Sbjct 1857589 AGTGTCTTACCCGTACCAGGCGGGCCAGACAAGATGGCGCCGCGAGGGATCTTTGCACCG 1857530 Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965 |||| ||| | |||||| |||||||||| || | |||| | |||| | Sbjct 1857529 AGCTTC--TCGTACTTCGCAGGCTCCTTGAGGAAGGAGACGAACTCCATGATCTCCTGTT 1857472 Query 11966 TGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 |||| ||| |||||| | || || |||| Sbjct 1857471 TGGCCTCGTCCATACCCGCGACGTCCTTGAA 1857441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974336142800