Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq199 159 8e-34 seq57 159 8e-34 seq1 150 4e-31 seq145 84.2 5e-11 >seq199 Length=104010 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || || ||| ||| || ||||| ||||| || | || |||| ||| ||||||| Sbjct 100612 CAAGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGA 100553 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| | || |||||||| ||||| |||||||| ||||| || | Sbjct 100552 GCTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGA 100493 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || || ||||| ||| || || |||||||||| ||||||| Sbjct 100492 TCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTC 100433 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| || || ||||| | |||||| Sbjct 100432 CTGTCAGGGTCTTGACGAAGATTTGCAT 100405 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||| || ||||| || || || | || || | |||||||| Sbjct 100891 ACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGCGTACGACCATCTTCC 100832 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || ||||||||||| |||||||| Sbjct 100831 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCTTGG 100772 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| || || ||||| || || | |||||| Sbjct 100771 ATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACTTCGAGAGTGATCGTCTTG 100712 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||||||| || ||||| | |||||| Sbjct 100711 CCCGTCAAAGTCTTCACGAAAATCTGCATT 100682 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||||||||| ||| |||||| || || |||||||||| || || | || || || | Sbjct 100056 CAAGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTA 99997 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || ||||||||||| || || || || || ||||| || || ||||| || | Sbjct 99996 GCTGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGA 99937 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| || || || ||||||||||| |||||||| || || | ||||| | Sbjct 99936 TCTTGGCCTTCACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGC 99877 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || ||||| | ||||| Sbjct 99876 CAGTAAGGGTCTTGACGAAGATCTGCAT 99849 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||||||||| ||| ||| || || || || || |||| ||| || | || || |||| Sbjct 100333 CAAGGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGA 100274 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | ||||| || || ||||| || ||||| ||||| || || || || || |||||||||| Sbjct 100273 GTTGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAA 100214 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| || ||||| || || ||| || || ||||||| ||||| | Sbjct 100213 TCTTCGCCTTGACGTTGTCGATGGTATCAGAGGATTCGACCTCCAGGGTAATGGTCTTGC 100154 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || ||||| | ||||| Sbjct 100153 CCGTGAGCGTCTTGACGAAAATCTGCAT 100126 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||||||| ||| || || || ||||| || | |||||| | ||||||||||||| Sbjct 99770 AGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCGAGC 99711 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| || |||||||| || ||||| ||||| ||||| || Sbjct 99710 TGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCGGGAGGGAT 99670 >seq57 Length=802683 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || || ||| ||| || || || ||||| |||| || |||| ||| ||||| ||| Sbjct 363120 AGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGC 363061 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 |||||||| |||||||| | || |||||||| ||||| |||||||| ||||| || || Sbjct 363060 TGCTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC 363001 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||| ||||| || || ||||| ||| || || |||||||||| ||||||||| Sbjct 363000 TTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCT 362941 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||| || ||||| | |||||| Sbjct 362940 GTCAGAGTCTTGACGAAGATTTGCAT 362915 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||| ||| |||||| || || |||||||||| || || | || || || ||| Sbjct 362562 AGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGC 362503 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || ||||||||||| || || || || || ||||| || || ||||| || || Sbjct 362502 TGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATC 362443 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||| || || || |||||||||||| |||||||| || || | ||||| || Sbjct 362442 TTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCA 362383 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 362382 GTAAGGGTCTTGACGAAGATCTGCAT 362357 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||| || ||||| || || || | ||||| | || ||||| Sbjct 363401 ACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGAGTACGACCGTCTTCC 363342 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| || ||||||||||| || || ||| Sbjct 363341 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCTTCCTTATCCTGA 363282 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| || || || || || || | |||||| Sbjct 363281 ATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGAGTGATCGTCTTG 363222 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||||||| || ||||| | |||||| Sbjct 363221 CCCGTCAAAGTCTTCACGAAAATCTGCATT 363192 Score = 125 bits (138), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||| ||| ||| || || || || || |||| ||| || | || || ||||| Sbjct 362838 AGGTGAAG-GTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGT 362780 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || ||||| || ||||| ||||| || || || || || ||||||||||| Sbjct 362779 TGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATC 362720 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||||||| || ||||| || || ||| || |||||||||| ||||| || Sbjct 362719 TTCGCCTTGACGTTGTCGATGGTATCAGATGATTCGACCTCAAGGGTAATGGTCTTGCCC 362660 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 362659 GTGAGCGTCTTGACGAAAATCTGCAT 362634 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||||||| ||| || || || ||||| || | |||||| | ||||||||||||| Sbjct 362278 AGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCGAGC 362219 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||| || |||||||| || ||||| ||||| ||||| || Sbjct 362218 TGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCGGGAGGGAT 362178 >seq1 Length=2270075 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| ||||| || ||||| || || || |||||||| | ||| || || || || || | Sbjct 785432 CAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCA 785491 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || || ||||| || ||||| || || ||||| || || || |||||||||| Sbjct 785492 GCTGCTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAA 785551 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || |||||||| ||| || || || ||||| | |||||| | Sbjct 785552 TCTTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGC 785611 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| ||||| | ||||| Sbjct 785612 CAGTCAATGTTTTGACGAAGATCTGCAT 785639 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || || ||||| |||| | || | ||||||||| Sbjct 785887 ACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCTTCG 785946 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| ||||| || || |||||||| || || ||||| ||| Sbjct 785947 AGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTGA 786006 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| ||| || ||||| || || | |||||| Sbjct 786007 ATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTCTTG 786066 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 786067 CCCGTGAGGGTCTTAACGAAGATCTGCATT 786096 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || ||||||||||| | || || | || || || |||||||| || Sbjct 785671 GTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCCTCAAGCTGCTTCCCA 785730 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || ||||| ||||| ||||| || ||||||||||| ||| |||| Sbjct 785731 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTG 785790 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || |||||||| || || || | |||| ||||| || || | ||| Sbjct 785791 ACATTGTCGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTCTTCCCGGTGAGAGTC 785850 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 785851 TTCACAAAGATCTGCAT 785867 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || |||||||||| || || | ||||| ||| Sbjct 786396 ACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCG 786455 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | || || || || || ||||| || || ||||| || Sbjct 786456 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGG 786515 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| ||||| || || || || || || | ||||| Sbjct 786516 ATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTG 786575 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 786576 CCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||||| || || || || |||||||| | || || | ||||| || Sbjct 786624 ACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCCGATAGTGTACGGCCATCCTCC 786683 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||||| || || ||||| || || ||||| ||||| |||||||||| Sbjct 786684 AGCTGTTTGCCAGCGAAAATCAGGCGTTGCTGGTCGGGAGGAATGC 786729 >seq145 Length=652196 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||||||||| || || | || || || Sbjct 199042 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCA 198983 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || |||||||| || || || |||||||| || || Sbjct 198982 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGGGGGAT 198939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478387357342