Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq150 111 2e-19 >seq150 Length=1432513 Score = 111 bits (122), Expect = 2e-19 Identities = 176/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 || |||||||||||| || | ||||||||| | |||||| || || || || || Sbjct 453176 CAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGT 453235 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 | || ||||| || || | || || | ||| ||||| | ||||||||| || || || Sbjct 453236 CAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAA 453295 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||| ||||| || ||||| || || || ||||||| || || |||| | | | | | Sbjct 453296 GAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTG-ACCGCTTGT 453354 Query 19137 ATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAG 19195 || ||||| || |||||||| |||||||| || | || || |||||||| || | Sbjct 453355 CCGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGG 453414 Query 19196 AATTAAATAG 19205 | |||||| Sbjct 453415 CGTCAAATAG 453424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107212042640