Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq57 114 1e-20 seq199 107 2e-18 >seq1 Length=2270075 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| || || || || |||||||| | | || || | || |||| || Sbjct 785436 ATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCAGCTG 785495 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| || | ||| || ||||| || || || || || || |||||||| || Sbjct 785496 CTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAATCTT 785555 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | |||||||| | || || || || |||| ||| ||||| || Sbjct 785556 CGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGCCAGT 785615 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || ||||| || || ||||||||| | |||||||| Sbjct 785616 CAATGTTTTGACGAAGATCTGCATGCCTCCGCGAAGA 785652 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || || || || ||||||||||| | || || | | || || | ||||| || Sbjct 785671 GTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCCTCAAGCTGCTTCCCA 785730 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || || | |||||| || || || || ||||| || || |||||||| ||| || Sbjct 785731 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTG 785790 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | ||||| || | || || || | || | || || ||||| | ||| Sbjct 785791 ACATTGTCGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTCTTCCCGGTGAGAGTC 785850 Query 101453 TTTACAAATATCTGCATG 101470 || ||||| ||||||||| Sbjct 785851 TTCACAAAGATCTGCATG 785868 >seq57 Length=802683 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || || || || | || ||| | | || |||| ||||| || || || Sbjct 363383 TCCTTCTGAATGTTATAGTCCGAGAGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAG 363324 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 ||||| ||||| || || |||||||||||||| ||||| ||||| || || ||| | Sbjct 363323 ATCAAGCGCTGCTGGTCAGGCGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTG 363264 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | |||||||||| || || || ||||||| ||| ||||| || ||||| || || Sbjct 363263 TCGATGGTGTCAGACGACTCGACCTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACG 363204 Query 101459 AATATCTGCAT 101469 || |||||||| Sbjct 363203 AAAATCTGCAT 363193 >seq199 Length=104010 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| |||| ||||| || || || |||| ||||| || || |||||||||||||| | Sbjct 100839 CATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCT 100780 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 | ||||| || || || || | || | |||||||||| || ||||| ||||||| Sbjct 100779 TGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACTTCGAGAGTGA 100720 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| ||||| || ||||| || || || |||||||| Sbjct 100719 TCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 100683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277308500682