Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq150 251 1e-61 >seq150 Length=1432513 Score = 251 bits (278), Expect = 1e-61 Identities = 396/562 (70%), Gaps = 15/562 (3%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| ||||| || |||||| ||| || || |||||||||||| |||| |||| Sbjct 455576 AGAGCAGGCAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGA 455517 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | ||| || ||||||| || | || ||||||||||| || | ||| || || |||| Sbjct 455516 ACGTGAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAG 455457 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG---AAGCGT 48299 |||||||||| ||||| ||||| ||||| || || | ||| | |||| | || Sbjct 455456 AGAAGAAGATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGC-AAAGCTCGACCG- 455399 Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 |||||| | ||||||| || |||||||| ||||||||||||||||| || || || | Sbjct 455398 -CTTGTCAGCGATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGT 455340 Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCA 48416 | ||||| ||| || | || || || | |||| | ||||| |||| | Sbjct 455339 CGATGGCATCGAATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGA 455280 Query 48417 GCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCC 48476 || | |||| |||| ||||| | ||||| || |||||||| |||||||| | Sbjct 455279 GC---GAGTACGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGC 455223 Query 48477 TGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCC 48536 |||||| | |||| || || ||||||| | ||| | || ||||| ||||| || | Sbjct 455222 GCGCCTCAGCCGCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGC 455163 Query 48537 CATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGG---G 48593 | || ||||| || ||||| ||||||||||| | ||| || |||||||||| | Sbjct 455162 CGTCGGAAGCGGCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCA 455103 Query 48594 TGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGG 48653 || | |||||| | || | ||| ||| ||||| | || || || |||||||| | Sbjct 455102 TGCGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATG 455043 Query 48654 ACGCGAGTGCTTTTTTGTACAT 48675 | || || || |||||||| Sbjct 455042 AGGCCTCGGCCTTCTTGTACAT 455021 Score = 188 bits (208), Expect = 1e-42 Identities = 397/585 (68%), Gaps = 18/585 (3%) Strand=Plus/Plus Query 48109 CAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGAT 48168 |||||||| |||||||| || ||||| || |||||| || ||||| ||| | || Sbjct 453161 CAGGTGCTG---ATAGAGCAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTAT 453217 Query 48169 GAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGC 48228 ||| |||||||||| || || ||||||| ||| | || || ||||| || || || Sbjct 453218 CAGCTCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGC 453277 Query 48229 CGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCC 48288 || || ||||| ||||||||||| ||||| ||||| ||||| || || | ||| | Sbjct 453278 AGCAAATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGC 453337 Query 48289 GAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCA 48348 ||| | |||||| || |||||| || ||||| || ||||||||||||||||| Sbjct 453338 AAAACTTGACCGCTTGTCCGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCA 453397 Query 48349 TGGCATCGTCTCTATGGCCCGGAAGAG--CTTCTTGCACTCACCTGCGTCCGCAACATAG 48406 || || ||||| ||||| || || ||| || || | | |||| | || Sbjct 453398 CGGTATTGTCTCGATGGCGTCAAATAGGCGGTCTCGCTCTTGC--GGGTCCTTGATGTAC 453455 Query 48407 GT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAAC 48463 || |||||||| | || |||| || || | ||||| || || ||||| Sbjct 453456 GTGTCGATGAGCAGC---GAATATGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAG 453512 Query 48464 CCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTC 48523 || ||||| | ||||| | |||||||| | ||||| | ||| | || ||| Sbjct 453513 CCATAGAAACATCGTGCCTCCGCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTC 453572 Query 48524 TCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGC 48583 || || ||||| ||||| || || || ||||| || ||||| || | ||| || ||| Sbjct 453573 TCGTTCACTATGCCATCGGAGGCGGCGAAGAATGCGAGGACGTGCGAGATGAAGTGCCGC 453632 Query 48584 TCGTTGTGGGTGA---GAGCATTCCAG-CCCTGTACGTCTTTGCCCAGGTCCACTTCTTC 48639 |||| || | ||| || |||||| ||| || ||| | ||||| | ||||| Sbjct 453633 TCGTCGTCGTTGAGGCGATGGTTCCAGTCCCAGT-GGTCGTGTGAAAGGTCTATCTCTTC 453691 Query 48640 CACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | | |||||||| || || |||| |||||||||| ||| || Sbjct 453692 CGCTGTCCAGAAAGATGCCTCGGCTTGCTTGTACATGCGCCAGAT 453736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530168419840