Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq150 210 4e-49 seq143 98.7 2e-15 >seq150 Length=1432513 Score = 210 bits (232), Expect = 4e-49 Identities = 336/473 (71%), Gaps = 12/473 (3%) Strand=Plus/Minus Query 25573 GACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTG 25632 ||||||| ||| || || | |||| | |||||||| || ||||| ||||| |||||| Sbjct 453637 GACGAGCGGCACTTCATCTCGCACGTCCTCGCATTCTTCGCCGCCTCCGATGGCATAGTG 453578 Query 25633 AACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTC 25692 |||||||| || |||| | ||| | | |||||||| | |||||| |||||| Sbjct 453577 AACGAGAACCTTGTCGAGCGCTTCTCGAATGAAGTGCAAGCTGCGGAGGCACGATGTTTC 453518 Query 25693 TACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG 25752 || || ||||| || || || || | || || ||| ||| | ||| || || Sbjct 453517 TATGGCTTCCAAATAATGATGGAGAACATTCATTCCGAGACATATTC---GCTGCTCATC 453461 Query 25753 ---ACGTACATTACAGACGTCGCC-GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACAT 25808 |||||||| | ||| ||| ||| |||| || || |||| ||||||||| || Sbjct 453460 GACACGTACATCAAGGACC-CGCAAGAGCGAGACCGCCTATTTGACGCCATCGAGACAAT 453402 Query 25809 ACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT-A 25867 ||| ||||||||| ||||||| ||||| | ||||| | | | || |||| | | Sbjct 453401 ACCGTGCATCAAGAAGAAGGCGGATTGGGCTCTCCGCTGGAT-ATCGGACA-AGCGGTCA 453344 Query 25868 CGTTTGGC-GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCG 25926 |||| || ||||| || || ||||| || || || ||||| ||||| ||| ||| || Sbjct 453343 AGTTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTATCTTCTTCTCCGGCTCA 453284 Query 25927 TTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAAC 25986 ||||| ||||| || ||||| ||| || ||| ||||||||||||| || |||||| Sbjct 453283 TTTGCTGCCATATTTTGGCTTAAGAAGCGCGGGCTCATGCCCGGGCTGACGTTCTCCAAC 453224 Query 25987 GAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||||| || | | | |||||||| | |||| |||||||| || |||||||| Sbjct 453223 GAGCTGATAATCCGCGACGAGGGAATGCACACCGATTTTGCATGTCTGCTCTA 453171 Score = 197 bits (218), Expect = 3e-45 Identities = 392/574 (68%), Gaps = 15/574 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | |||| |||||| | ||| ||||| || || Sbjct 455012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACCTC 455071 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||||||| | ||| |||| || || | | | | |||||| || || || Sbjct 455072 TCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACA-ACGAGCGACACTTCATCTC 455130 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | || | || ||||| || || || || || || || |||||||| || |||| | Sbjct 455131 CCATGTCCTTGCTTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGAGCG 455190 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| ||| || || ||| | ||||| ||||||||||| |||||||| || Sbjct 455191 TTTCTCCAACGAGGTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATGAT 455250 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| ||| | ||| || || || ||||| | ||| Sbjct 455251 GGAGAACATCCACTCCGAGACGTACTC---GCTCCTCATCGACACCTACATCAAGGACCC 455307 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | || | || || | ||||||||| ||| ||| ||||||||| |||||| Sbjct 455308 TAAGCAGCGCGAGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGC 455367 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT--ACGTTTGGCGAGCGGCTGGTA 25887 | ||||| | |||||| | | || |||| | | |||| ||||| ||||| Sbjct 455368 GGACTGGGCTCTCCGCTGGATCG-CTGACA-AGCGGTCGAGCTTTGCTGAGCGACTGGTG 455425 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 ||||| ||||| || ||||| ||||| ||| || || |||||| |||| ||||||||| Sbjct 455426 GCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTTGCGTCCATATTCTGGCTC 455485 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||||||| || || || ||||||||||||||| | || ||| Sbjct 455486 AAGAAGCGTGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGAG 455545 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || | |||| |||||||| |||||||||| || Sbjct 455546 GGCATGCACACCGATTTTGCTTGCCTGCTCTTCA 455579 >seq143 Length=661151 Score = 98.7 bits (108), Expect = 2e-15 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAG-TCTCTTGGCCTCGGGAGAAGT 221481 ||||| ||||| || ||||| |||| |||||||||| || | || | ||||| || Sbjct 573872 GCAGCATGGTATATCGTCTCCGCGATCCTCTTGTTGAGGTCACGTG-CTTCGGGCGAGTC 573814 Query 221482 GAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGG 221540 ||||||||| || || | |||||| ||||||| || ||||| || ||||||||||| | Sbjct 573813 GAAGGGCATGCGGAGGGCCATGAAAG-CGTCGGCGAGGCCCTGCACACCGATACCGATCG 573755 Query 221541 GCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 | | ||| | | |||||| | || | || || || | ||| || |||||| || || Sbjct 573754 GACGGTGGCGCATGTTGG-ATCGACGAGCCTCGGGGATGGGGTAGTAGTTGATATCAATG 573696 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650 | | ||| ||||| | |||| ||| || | ||| |||||||||| Sbjct 573695 ATACGGTTCAGGTTGAAGGTGACGACCTTCGTAATATCGTGCAGCTTCTGG 573645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842176013440