Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq150 145 9e-29 seq144 107 2e-17 seq143 105 8e-17 >seq150 Length=1432513 Score = 145 bits (160), Expect = 9e-29 Identities = 184/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||||||||||| || | | |||| ||| | || Sbjct 455265 GAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCGCCTGT 455206 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || || | ||||||||| |||||||||||| |||||||| Sbjct 455205 ACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAG 455146 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 ||||| ||||| || ||| ||||| ||||||| |||| | | ||| ||||| | Sbjct 455145 AAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTCCAGTCG 455086 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||| | |||||| | ||||||| | ||||||| |||||||||||||| ||| Sbjct 455085 TGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGCCTTCTTG 455026 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 455025 TACATCTGCCA 455015 Score = 136 bits (150), Expect = 5e-26 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||||||||| ||| || ||| |||||| ||||||||||| |||| ||||||||| Sbjct 455912 CGCCTTGGCGTAGTCGGAGACACGCTTCTCGAAGAAGTTGGTCTTCCCCTGGAGCGAGAT 455853 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 || ||||| | ||| ||||| | | ||||| ||| | ||||||| | Sbjct 455852 CATGTCCATGAAGTCGAAGGGGTTCGACACGTTGTACACCTTCGGGTCACCGAGCGCGAC 455793 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| Sbjct 455792 GAGAAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGTGTCGCGTTCATGCCGAT 455733 Query 868870 GAG 868872 || Sbjct 455732 TAG 455730 Score = 132 bits (146), Expect = 6e-25 Identities = 205/288 (71%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| | |||| |||||| || | || ||||||||||| ||||||||| Sbjct 453201 CCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTC 453260 Query 869240 TTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 || |||||||| ||||| ||| || ||| ||||| ||||| |||||||| ||||| || Sbjct 453261 TTAAGCCAAAATATGGCAGCA-AATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAA 453319 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | || ||||| ||||| | || | ||||| ||||| | || Sbjct 453320 GGCCACTAGTCGCTCAGCAAA--ACTTGA----CCGCTTGTCCGATATCCAGCGGAGAGC 453373 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 ||| || ||||| ||| | | |||| | || ||||||||| ||| ||| |||| Sbjct 453374 CCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTCAAATAGGCGGTCTCG 453433 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct 453434 CTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGTCTC 453481 Score = 129 bits (142), Expect = 7e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||||| ||| |||||| |||||| ||||||||||| |||| ||||| || Sbjct 452829 CGCCTTAGCGTAGTCGGAGACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGAAGCGAAAT 452888 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 || ||||| | ||||| || | | | ||| || ||| || || ||||| | Sbjct 452889 CATGTCCATGAAATCAAACGGATTTGTTGCATGGTAATGTTTTGCGTTCCCTAGCGATAC 452948 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 | ||| | |||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 452949 CAACAGTCTGTCGGCGACAAACTCGATATACTGGCACATCAGCTGTGCGTTCATGCCGAT 453008 Query 868870 GAGCGC 868875 |||||| Sbjct 453009 GAGCGC 453014 Score = 123 bits (136), Expect = 3e-22 Identities = 203/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || || || ||||| | ||||| || | ||||||||||||||| || |||||| Sbjct 455547 CCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGACCACGCTTC 455488 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| || |||| |||| || || ||||| ||||| |||||||| || || || Sbjct 455487 TTGAGCCAGAATATGGACGCA-AAGGATCCAGAGAAGAAGATACCCTCGACTGCAGCGAA 455429 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | || ||||| |||||| |||| | ||||| |||||| | || Sbjct 455428 GGCCACCAGTCGCTCAGCAAAG--CTCGA----CCGCTTGTCAGCGATCCAGCGGAGAGC 455375 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||| ||||| ||| | | | || | ||||||||||| || ||||| || Sbjct 455374 CCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCGAATAGGTGCTCGCG 455315 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||||||||| ||||||||||| |||||||| || ||||| Sbjct 455314 CTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACGTCTC 455267 Score = 111 bits (122), Expect = 2e-18 Identities = 177/251 (71%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || |||||||| || || |||||||| || || | |||| || |||| Sbjct 453483 GAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGCAGCTTGC 453542 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || ||| ||| || || | ||||||||| ||| ||||| ||| ||||||||| Sbjct 453543 ACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAGGCGGCGAAG 453602 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA------CA--CC 869803 || || ||||||||| ||| ||||| |||||||||||| ||| |||| || || Sbjct 453603 AATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTCGTCGTTGAGGCGATGGTTCCAGTCC 453662 Query 869804 CAGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 |||||| | |||| ||||| | ||| || || ||||||| || |||||||| Sbjct 453663 CAGTGGTC-GTGT-----GAAAGGTCTATCTCTTCCGCTGTCCAGAAAGATGCCTCGGCT 453716 Query 869864 TTTTTGTACAT 869874 | |||||||| Sbjct 453717 TGCTTGTACAT 453727 >seq144 Length=659063 Score = 107 bits (118), Expect = 2e-17 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||||||||||||||| |||||| ||| ||||| | || ||||||||||| Sbjct 498894 CATCGGCGGCACGGTGACCTGCGTGGTGCGCGGTGTGCCCCCGGGGCTCGGCGAGCCCGT 498953 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 ||| |||||| ||||||| |||||| ||||| ||||| || ||||| || || |||| Sbjct 498954 CTTCGACAAGCTCGAGGCGAAGCTCGCGCACGCGATGCTCTCCATCCCCGCAACGAAGGC 499013 Query 19172 ATTCGAGATTGG 19183 |||||||| || Sbjct 499014 GTTCGAGATCGG 499025 Score = 95.1 bits (104), Expect = 1e-13 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 ||||||| || ||||| ||||||||||| |||||||| |||| ||| |||| Sbjct 620671 CGTCATCGAGTTCGACGGTTCCTACGTCAACTACCGCCACCTTGCCCTGCTGTGCGACCT 620730 Query 512110 CATGTGCTGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCA 512169 |||| | |||||| | || ||||| |||| || || || |||| |||||||| || Sbjct 620731 CATGACCCACCGCGGTACACTGATGGCCATCACACGTCATGGTATCAATCGCGCCGA-CA 620789 Query 512170 CGGCTTC-CTGTCGCGGGCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGG 512228 | | | | || |||| ||| ||||||||||| || || |||||| | || ||||| | Sbjct 620790 CTGGTGCATTGATGCGGAGCTCGTTCGAAGAGACGGTAGAGATCCTCATGGAAGCGGCCG 620849 Query 512229 C 512229 | Sbjct 620850 C 620850 >seq143 Length=661151 Score = 105 bits (116), Expect = 8e-17 Identities = 219/328 (67%), Gaps = 15/328 (5%) Strand=Plus/Minus Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||| ||||| || | ||| ||| | || || | |||||||||||||| || || Sbjct 572852 GCCGATACCGCCCGCAGTCTTACTGATCATGGCACAGTTCTTGAGCGTGTCGTAAATACC 572793 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| |||||| ||||||| |||||| ||||| || || ||||| | ||| Sbjct 572792 CTCGATGGAGTCGTCCTTCATACACACGAGGAAGCATGAGCTCAGCTGGGGGTGTGGCGT 572733 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 ||| || ||||| || ||||| | || ||||| | | | ||||| || ||| Sbjct 572732 GCCAGCATTGAACAGTGTGGGTGATGCGTGTGTGAAGTAACGGAGAGACATCAGGTTGTA 572673 Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421 ||| ||| ||| ||| || | ||||| | |||| ||||| || Sbjct 572672 GGTCTCGATCACTCGC------------TCGATGTCGG---AGCCATGAATGCCGACAGC 572628 Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTA 1630481 || ||||||||||||| ||| || |||||| ||||| || | |||| ||||| Sbjct 572627 AACACGCATGAGCATGTGCTGAGGACGCTCGGCGACGCGCCCATTGAGCTTGAGGAGGTA 572568 Query 1630482 GGACCGGCGCATGGTCATGAGGCCAAAG 1630509 ||||| | ||| ||| ||||||| Sbjct 572567 TGACCGCTCAAGGGTTTTGAAGCCAAAG 572540 Score = 105 bits (116), Expect = 8e-17 Identities = 172/241 (71%), Gaps = 10/241 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 |||||||||||| |||||||| || | || ||||| | ||||||||| ||||||||||| Sbjct 574571 CTGGTCGACGGTGAACTGGATAGCCTGTGCAGCGGGGCGGGTGCGCAGGTAGTACATGCC 574512 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCG- 1627099 ||||||||||| |||| ||||| |||||| ||| | || | ||||| Sbjct 574511 TGTCTTGAGGCCCTTCTTCCACCCGTAGAAGTGCATGCTCGTCA---ACTGGCCCGTCGT 574455 Query 1627100 CGTCGGC-GCA-GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || || | ||| || || ||||| ||| |||||||| | | | | | || ||||| Sbjct 574454 CGGCGACTGCAGGTGCACATTGAGGCTCTGACTCTGGTCAATGAACGCCCCACGGTCGGC 574395 Query 1627158 CGCCATGTCGATGGTGACCCGGTTGGGC--ACCTCCCACACGGTCTTGAAGATGGCCTTG 1627215 |||||||||| | | || ||| | |||||| || |||||| |||| |||||| Sbjct 574394 AGCCATGTCGAGAATTTTC--TTTTGGCTGATCTCCCAGACCGTCTTGTAGATCGCCTTG 574337 Query 1627216 A 1627216 | Sbjct 574336 A 574336 Score = 98.7 bits (108), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 ||||||||||||||||||| |||| || ||||| |||||||||| ||| || | || | Sbjct 573787 CGTCGGCGAGGCCCTGCACACCGATACCGATCGGACGGTGGCGCATGTTGGATCGACGAG 573728 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 1627974 ||||||| | ||||||| |||||| || || | ||||| |||||| Sbjct 573727 CCTCGGGGATGGGGTAGTAGTTGATATCAATGATACGGTTCAGGTTG 573681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107120653381642