Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq143 118 1e-21 seq199 109 5e-19 seq57 105 6e-18 >seq1 Length=2270075 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || |||||||| || || | | Sbjct 786605 GATGCAGATCTTTGTCAAGACACTCACGGGCAAGACAATCACGCTCGAGGTCGAGTCGTC 786546 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || |||||||| Sbjct 786545 CGACACGATTGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCA 786486 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||||||| || || ||||| |||||| | | |||| ||||| || Sbjct 786485 GCAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAGGATGGTCGTACGCTGTCCGATTACAA 786426 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || |||||| | || | || |||| || || Sbjct 786425 CATCCAGAAGGAGTCTACCCTACACCTCGTACTTCGCCTGCGTGGCGG 786378 Score = 109 bits (120), Expect = 5e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| | || || || || || || ||||| || || | | Sbjct 785639 ATGCAGATCTTCGTCAAAACATTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCTTCT 785580 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || ||||| ||||| Sbjct 785579 GACACCATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAG 785520 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| ||||| ||||||||||| || | | || ||||| ||| Sbjct 785519 CAACGTCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGTAGGACGCTTTCGGATTACAAC 785460 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 || || ||||| || || || || |||||| Sbjct 785459 ATCCAGAAGGAGTCTACCCTTCATCTTGGT 785430 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || |||||| | || || || | | Sbjct 785867 ATGCAGATCTTTGTGAAGACTCTCACCGGGAAGACCATTACGTTGGAGGTCGAGTCATCG 785808 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| |||||||| || || || ||||| || || Sbjct 785807 GACACGATCGACAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 785748 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || ||||| ||||| ||||| | | | | || ||||| || Sbjct 785747 CAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGTCGTACCCTCTCGGATTACAAT 785688 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| | || ||||| | || | ||||||||| Sbjct 785687 ATCCAGAAGGAGTCGACGTTGCATCTGGTGCTTCGTCTTCGCGGAGGC 785640 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || || ||||||||||| || | | Sbjct 786095 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACGATCACGCTCGAAGTCGAGTCTTCT 786036 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| ||||| Sbjct 786035 GACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAG 785976 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| || ||||| ||||| || ||| | | |||| || || ||| Sbjct 785975 CAACGCCTTATCTTCGCTGGGAAGCAGCTCGAAGATGGCCGGACGTTGTCCGACTACAAC 785916 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || || | || | || ||||||| ||| Sbjct 785915 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGGCTGCGCGGTGGC 785868 >seq143 Length=661151 Score = 118 bits (130), Expect = 1e-21 Identities = 255/378 (67%), Gaps = 4/378 (1%) Strand=Plus/Minus Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| ||||||| || | |||||||| |||| ||||||| || | ||| |||||||| Sbjct 574118 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGACTTGTCGACGCTGTCGGCATA 574059 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACC-GTGAA-GCTTGATTCGTTCCTTGAGCGACG 138670 ||| || | ||| || |||| | || || || ||| ||||||||||| | Sbjct 574058 GGCGCAACAAGAAGCGAGTTCCTCAGGCCCGTCTTCGCCACCTTC--TCCTTGAGCGATG 574001 Query 138671 ACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAAC 138730 |||||||||||| || | || | ||||| || ||||| | | ||| Sbjct 574000 CCCAGTCCCACAAGTCTGTTGGCGTAACACCCCACAGGTCATACTGAAGCTGGCCCTGGG 573941 Query 138731 TTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCG 138790 ||| |||||||| | ||||| |||||| |||| | || | ||| |||||| Sbjct 573940 ATGCAGGACTGCCCTGGTACGTCTCGTATGGACCATCGACCGCAGCGATCTCACTGCTCG 573881 Query 138791 CCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGG 138850 |||||| |||| ||| ||| || || || || ||| || ||||| || || |||| Sbjct 573880 CCTCGACCGCAGCATGGTATATCGTCTCCGCGATCCTCTTGTTGAGGTCACGTGCTTCGG 573821 Query 138851 CGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910 ||| | ||||||||||| | |||| |||||||| || || ||||| || | | Sbjct 573820 GCGAGTCGAAGGGCATGCGGAGGGCCATGAAAGCGTCGGCGAGGCCCTGCACACCGATAC 573761 Query 138911 CGACAGGGCGATGGCGCA 138928 ||| || || ||||||| Sbjct 573760 CGATCGGACGGTGGCGCA 573743 >seq199 Length=104010 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || |||||||| || || || || | || Sbjct 100405 ATGCAAATCTTCGTCAAGACCCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 100464 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || |||| ||| | || |||||| ||||| ||||| || ||||| || || Sbjct 100465 GACACAATCGACAACGTTAAGGCGAA-GATCCAGGACAAGGAAGGCATCCCTCCGGACCA 100523 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||||||||||| || || || ||||| || || | ||| | || || || || Sbjct 100524 ACAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAAGACGGGCGAACGCTCTCTGACTACAA 100583 Query 24883 CATTCAAAAGGA 24894 |||||| ||||| Sbjct 100584 CATTCAGAAGGA 100595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || || || || |||||||| || | | Sbjct 100683 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAAGTCGAGTCGTCT 100742 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 100743 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATTCCGCCTGACCAG 100802 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||| ||| | | | || || |||||| Sbjct 100803 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACGCTCTCGGACTATAAC 100862 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || ||| | ||| |||| | ||||| ||| Sbjct 100863 ATTCAGAAGGAGAGTACTCTCCACCTCGTGCTGCGTCTCCGCGGTGGC 100910 >seq57 Length=802683 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || |||||||| || || || || | || Sbjct 362915 ATGCAAATCTTCGTCAAGACTCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 362974 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || |||| ||| | || |||||| ||||| ||||| || ||||| || || Sbjct 362975 GACACAATCGACAACGTTAAGGCGAA-GATCCAGGACAAGGAAGGCATCCCTCCGGACCA 363033 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||||||||||| || || || ||||| || || | ||| | || || || || Sbjct 363034 ACAGCGTTTGATCTTCGCTGGTAAGCAGCTAGAAGACGGGCGAACGCTCTCCGACTACAA 363093 Query 24883 CATTCAAAAGGA 24894 ||| || ||||| Sbjct 363094 CATCCAGAAGGA 363105 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||||||||| || | | Sbjct 362357 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTCG 362416 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || ||||| Sbjct 362417 GACACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAG 362476 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || | ||||| || || || ||||| ||||| Sbjct 362477 CAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGA 362511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896329039280