Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq144 176 4e-39 seq1 89.7 4e-13 >seq144 Length=659063 Score = 176 bits (194), Expect = 4e-39 Identities = 199/264 (75%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| || || ||||| ||||| | || | |||| ||| |||||| |||||| || Sbjct 437485 GATCAGGTCCGTCTCGGGGTTCTTGCACGACTTGCACAGCACGAACTTGTCGATGAAGCC 437544 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||||||||| || | ||||| | | |||||| | |||||||||||| | || ||||| Sbjct 437545 ATCAAGCAGCTCACGCAACTTGGCTGCGTCGTGCGCCCCGTTGACGATGTAACGATCGTT 437604 Query 34431 TTTGTAATCGACCTGCG-TTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAA 34489 || | ||| || | | ||| ||||| |||||||| |||||| |||| ||||| || | Sbjct 437605 CTTCTCGTCG-CCGGTGACTTGAGCGCCGAGCTCGCAGCCGAAGAACTTAGTCGGATACA 437663 Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||| ||| || | |||||| ||||| |||| ||||||| |||||| ||||| |||| Sbjct 437664 TGGGCGGTCGACTGAGCGCCCGGGCGACGTCGGACATGTTGGGGATGACGGTCTTAATGC 437723 Query 34550 CGTTGCCCTTTCCTTCGACCTTGG 34573 | ||||||||||| |||| ||||| Sbjct 437724 CATTGCCCTTTCCCTCGATCTTGG 437747 >seq1 Length=2270075 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || |||||||| || || ||||| || || ||| |||| ||| || Sbjct 785639 ATGCAGATCTTCGTCAAAACATTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCTTCT 785580 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||||| ||||| || || | || |||||| Sbjct 785579 GACACCATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAG 785520 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || ||||||||||| | || || | ||||||||||| Sbjct 785519 CAACGTCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGTAGGACGCTTTCGGATTACAAC 785460 Query 110453 ATTCAAAAAGAATCTAC 110469 || || || || ||||| Sbjct 785459 ATCCAGAAGGAGTCTAC 785443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840462879418