Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq150 167 4e-35 seq143 96.9 5e-14 seq1 87.8 3e-11 >seq150 Length=1432513 Score = 167 bits (184), Expect = 4e-35 Identities = 234/326 (72%), Gaps = 3/326 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| | |||| |||||| || || ||||||||||| ||||||||| Sbjct 453201 CCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTC 453260 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || |||||||| |||||| || ||| ||||| ||||| |||||||| ||||| ||| Sbjct 453261 TTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAAG 453320 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | || || ||||| |||||| | | | | | | | | ||||| | ||||| Sbjct 453321 GCCACTAGTCGCTCAGCAAAACTTGACCG--CTTGTCCGAT-ATCCAGCGGAGAGCCCAA 453377 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | | || | || ||||||||| ||| ||| |||| ||| Sbjct 453378 TCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTCAAATAGGCGGTCTCGCTCT 453437 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||||||||||| ||| ||||||||||| ||||| || ||||| || || ||||| || Sbjct 453438 TGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGTCTCGGAATGAATGTTCTCC 453497 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||||| || || Sbjct 453498 ATCATTATTTGGAAGCCATAGAAACA 453523 Score = 161 bits (178), Expect = 2e-33 Identities = 216/296 (73%), Gaps = 11/296 (4%) Strand=Plus/Minus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCC-GAGA 794434 ||||||||||||||| || |||||||||||||| || |||| || ||| || |||| Sbjct 455512 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGG-ACGCAAAGGATCCAGAGA 455454 Query 794435 AAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCT 794494 | ||||| |||||||| || || ||| | || || ||||| ||||| | | || Sbjct 455453 AGAAGATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTC-----GACCG 455399 Query 794495 CTTTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGT 794551 ||| || |||||| | ||||| || ||||| ||| | | |||| | |||| Sbjct 455398 CTT-GTCAGCGATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGT 455340 Query 794552 CGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGA 794611 ||||||| || ||||| || || |||||||||| ||||||||||||||||| Sbjct 455339 CGATGGCATCGAATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGA 455280 Query 794612 GCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||| ||||| ||||||||||| || || ||||||||||| || || ||| Sbjct 455279 GCGAGTACGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAG 455224 Score = 132 bits (146), Expect = 8e-25 Identities = 146/193 (76%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| ||||||||||| || ||| || ||| |||||| ||||||||||| |||| || Sbjct 455919 TGACACCCGCCTTGGCGTAGTCGGAGACACGCTTCTCGAAGAAGTTGGTCTTCCCCTGGA 455860 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGC---TTCTCGCACC 794007 ||||||||| ||||| | ||| ||||| || || || || | ||| | | Sbjct 455859 GCGAGATCATGTCCATGAAGTCGAAGGGGTT---CGACACGTTGTACACCTTCGGGTCAC 455803 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 |||||| | || ||||||||||| ||||| || ||||||||||||||||| | |||| Sbjct 455802 CGAGCGCGACGAGAAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGTGTCGCGT 455743 Query 794068 TCATGCCGATGAG 794080 |||||||||| || Sbjct 455742 TCATGCCGATTAG 455730 Score = 114 bits (126), Expect = 2e-19 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || |||||||| || || ||| |||||| |||||| ||||||||||| |||| ||| Sbjct 452824 ACTCCCGCCTTAGCGTAGTCGGAGACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGAAGC 452883 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 || |||| ||||| | ||||| || | | |||| || || || ||| ||| Sbjct 452884 GAAATCATGTCCATGAAATCAAACGGATTTGTTGCATGGTAATGTTTTGCGTTCCCTAGC 452943 Query 794013 GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATG 794072 || | | ||| | ||||||||| || || || ||||||||||| || ||||||||| Sbjct 452944 GATACCAACAGTCTGTCGGCGACAAACTCGATATACTGGCACATCAGCTGTGCGTTCATG 453003 Query 794073 CCGATGAGCGC 794083 ||||||||||| Sbjct 453004 CCGATGAGCGC 453014 Score = 109 bits (120), Expect = 9e-18 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | ||||| | |||| || || ||| |||||| || | |||||||| | Sbjct 453519 AAACATCGTGCCTCCGCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTC 453578 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 || ||||| ||| ||||||||| || |||||||||||| ||| ||||| ||||||||| Sbjct 453579 ACTATGCCATCGGAGGCGGCGAAGAATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTCG 453638 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGT-GTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316 ||| ||| |||| | ||||| | || |||| ||||| | ||| || || || Sbjct 453639 TCGTTGAGGCGATGGTTCCAGT-CCCAGTGGTCGTGTGAAAGGTCTATCTCTTCCGCTGT 453697 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACAT 796346 ||| || || |||||||| | |||||||| Sbjct 453698 CCAGAAAGATGCCTCGGCTTGCTTGTACAT 453727 Score = 109 bits (120), Expect = 9e-18 Identities = 157/219 (72%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | ||||| | | || ||||| || ||| || || | |||||||| Sbjct 455229 AAACAGCGCGCCTCAGCCGCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTG 455170 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||||||| |||||||| || || ||||| || ||| ||||| ||||||| | Sbjct 455169 ACGATGCCGTCGGAAGCGGCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTG 455110 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| | | ||| | ||||| | ||| | |||||||| ||||||| | ||| Sbjct 455109 TCGTTCATGCGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTC 455050 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || || |||||||||||||| |||||||||| ||| ||| Sbjct 455049 CAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCAGATC 455011 >seq143 Length=661151 Score = 96.9 bits (106), Expect = 5e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || |||||||| ||||||||||| |||| || ||||| |||||||||| ||| || | Sbjct 573791 AAAGCGTCGGCGAGGCCCTGCACACCGATACCGATCGGACGGTGGCGCATGTTGGATCGA 573732 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 || |||||||| | ||||||| |||||| || || | ||||| |||||| Sbjct 573731 CGAGCCTCGGGGATGGGGTAGTAGTTGATATCAATGATACGGTTCAGGTTG 573681 Score = 96.9 bits (106), Expect = 5e-14 Identities = 137/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| |||||||| || | || || || ||||||||||| ||||||||||| Sbjct 574570 TGGTCGACGGTGAACTGGATAGCCTGTGCAGCGGGGCGGGTGCGCAGGTAGTACATGCCT 574511 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA--TGGACTCGGCATTCG 2069368 ||||||||||| |||| ||||| |||||| ||| | ||| | || | | | Sbjct 574510 GTCTTGAGGCCCTTCTTCCACCCGTAGAAGTGCATGCTCGTCAACTGG-CCCGTCGTCGG 574452 Query 2069369 GGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCG 2069428 ||| ||| || | ||||| ||| |||||||| | | | | | |||||||| | Sbjct 574451 CGACTGCA-GGTGCACATTGAGGCTCTGACTCTGGTCAATGAACGCCCCACGGTCGGCAG 574393 Query 2069429 CCATGTCGA 2069437 ||||||||| Sbjct 574392 CCATGTCGA 574384 >seq1 Length=2270075 Score = 87.8 bits (96), Expect = 3e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || |||||||||||||| || ||||||| ||| ||||||| |||||||| ||||| Sbjct 1443856 GCTCAGCAGGCCCTCCGGCGAACGATGGAAATCTACGCCAACACTACGCGGTTCGCGCTC 1443915 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || ||||||| ||| | | ||||||| | | ||||| || ||||| ||| ||||| Sbjct 1443916 GCGTGCAACATGTCAAACAAGATCATCGAGCCTATACAGAGTCGATGCGCGATCCTGCGC 1443975 Query 2019375 T 2019375 | Sbjct 1443976 T 1443976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916222359349214