Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 120 7e-22 seq57 100 7e-16 seq199 95.1 3e-14 >seq1 Length=2270075 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||| | ||||| || ||||||||| |||| Sbjct 786080 AAGACCCTCACGGGCAAGACGATCACGCTCGAAGTCGAGTCTTCTGACACGATCGACAAC 786021 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || ||| ||||| ||| | ||||||||| Sbjct 786020 GTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAGCAACGCCTTATCTTC 785961 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | |||||||| |||| ||| |||| |||||| ||||||| ||||| Sbjct 785960 GCTGGGAAGCAGCTCGAAGATGGCCGGACGTTGTCCGACTACAACATCCAGAAGGAGTCG 785901 Query 206365 ACTCTTCACCTTGT 206378 || ||||| || || Sbjct 785900 ACGCTTCATCTCGT 785887 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| ||||| || |||||| |||| || || || |||||| Sbjct 786373 CAGATCTTTGTCAAGACTCTCACGGGAAAGACTATCACTCTGGAGGTCGAGAGCTCTGAC 786314 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| |||||||| || || || || || ||||| || Sbjct 786313 ACAATCGACAATGTTAAGGCTAAGATTCAGGATAAGGAGGGCATCCCTCCGGATCAGCAG 786254 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || |||||||||||||| || | || || | || |||||| || Sbjct 786253 CGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTGTCTGACTACAACATC 786194 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||| ||||| || |||||||| Sbjct 786193 CAGAAGGAGTCCACGCTTCACCT 786171 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || || |||||||| | || || || ||||||| Sbjct 785636 CAGATCTTCGTCAAAACATTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCTTCTGAC 785577 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || ||||| ||| Sbjct 785576 ACCATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAGCAA 785517 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || |||||| |||| || || ||||| | | ||||||||| || Sbjct 785516 CGTCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGTAGGACGCTTTCGGATTACAACATC 785457 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| |||||||| ||||| |||| Sbjct 785456 CAGAAGGAGTCTACCCTTCATCTTG 785432 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || || ||||| || ||||| ||||||| || ||||| | ||| |||| |||||||| Sbjct 785887 ACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCTTCG 785946 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| || ||||||||||| ||||| ||| Sbjct 785947 AGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGA 785979 >seq57 Length=802683 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | |||||||| ||| ||| Sbjct 362360 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTCGGAC 362419 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| || || || || || ||| ||||| || Sbjct 362420 ACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAGCAG 362479 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| | || || ||| |||| | ||||||||||| || Sbjct 362480 CGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAACATC 362539 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||||||| || |||||||| Sbjct 362540 CAGAAAGAGAGCACACTTCACCT 362562 >seq199 Length=104010 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | |||||||| || ||| Sbjct 99852 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCATCGGAC 99911 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| ||||| || Sbjct 99912 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAGCAG 99971 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| | || || ||| |||| | ||||||||||| || Sbjct 99972 CGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAACATC 100031 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||||||| || |||||||||| Sbjct 100032 CAGAAAGAGAGCACACTTCACCTTG 100056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817377890146