Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq183 104 3e-17 >seq183 Length=1202715 Score = 104 bits (114), Expect = 3e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| |||||||| || ||||| | ||||||| |||| | || || ||| Sbjct 46801 AGCTGGTCGACGCCCTGCCCGGTGTAGTCCGCGTCGCAGTCTGTGTACTTCGCGCCGAAG 46860 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 ||||||||||||||||| ||||| || |||||||| || | || ||| | || Sbjct 46861 TGCCTCCACTGGAAGCCATACACCGGGCCCAGGTCTCCTTCTCTCCTATGCCCCAGTCCA 46920 Query 147352 GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAG 147411 | || ||| || || | ||| | | ||||| || | ||||| ||||| Sbjct 46921 CGCTTCTCGAGGAATTCCTTGCTCCCATTCCCATCCCAAATCTTGATGCCCTTCGCGGAC 46980 Query 147412 AGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTC 147471 || ||| || || || ||||| ||||||||||| ||||| ||||||| || || | | Sbjct 46981 AGAAGCTTGGAATCAGTCGAGCCGCGGATGAACCATAGCAGTTCCTCCAGAATACCGCGC 47040 Query 147472 CAAAA 147476 ||||| Sbjct 47041 CAAAA 47045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486351646400