Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq150 239 6e-57 seq143 107 3e-17 >seq150 Length=1432513 Score = 239 bits (264), Expect = 6e-57 Identities = 365/509 (72%), Gaps = 16/509 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||| | ||||||| |||||| Sbjct 455011 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACC 455069 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| ||| |||| ||||||| || |||||| Sbjct 455070 TCTCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACAACGAGCGACACTTCATCT 455129 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || ||||| || ||| |||||||| ||| |||||||| ||||||||| | || Sbjct 455130 CCCATGTCCTTGC-TTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGAG 455188 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || ||||| || | | ||||| || | || ||||| |||||||| Sbjct 455189 CGTTTCTCCAACGAGGTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATG 455248 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || ||||||||||| |||||||||||| |||||||||| Sbjct 455249 ATGGAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTACATCAAGGACCCT 455308 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 || || ||||| || ||||||||||| | || | | | ||| ||||| Sbjct 455309 AAGCAGCGCGAGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCG 455368 Query 1456132 GACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| | |||||| ||||| | |||| |||||| ||||| || | Sbjct 455369 GACTGGGCTCTCCGCTGGATCGCTGACAAGCGG----TCGA-GCTTTGCTGAGCGACTGG 455423 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 | | ||| || || |||||||| ||||| ||||| || | | |||| |||| || ||| Sbjct 455424 TGGCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGG-ATCCTTTGCGTCCATATTCTGG 455482 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||| || ||||||||||| || Sbjct 455483 CTCAAGAAGCGTGGTCTCATGCCCGGCCT 455511 Score = 224 bits (248), Expect = 1e-52 Identities = 368/518 (71%), Gaps = 28/518 (5%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| |||||| | ||| ||||||| || || ||||| || || ||| | | Sbjct 453740 GCAGATCTGGCGCATGTACAAGCAAG-CCGAGGCATCTTTCTGGACAGCGGAAGAGATAG 453682 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGG--TG------TCGC-TGAGCGACGACGAGCGCC 1455882 |||| ||||| |||||||| || |||| | | |||||||||||| | Sbjct 453681 ACCTTTC-----ACACGA-CCACTGGGACTGGAACCATCGCCTCAACGACGACGAGCGGC 453628 Query 1455883 ATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAAC 1455942 | |||||| |||||||||||| || || ||||||| ||||||||| ||| ||||||| Sbjct 453627 ACTTCATCTCGCACGTCCTCGCATTCTT-CGCCGCCTCCGATGGCATAGTGAACGAGAAC 453569 Query 1455943 CTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTC 1456002 || | || ||||| ||| || || ||| | |||||||| | || || || ||| Sbjct 453568 CTTGTCGAGCGCTTCTCGAATGAAGTGCAAGCTGCGGAGGCACGATGTTTCTATGGCTTC 453509 Query 1456003 CAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTC 1456062 || || || || ||||| || || || || || ||||| || |||||||| ||| || Sbjct 453508 CAAATAATGATGGAGAACATTCATTCCGAGACATATTCGCTGCTCATCGACACGTACATC 453449 Query 1456063 AAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGG 1456122 ||||||||| ||| |||| ||| ||| ||||||||| || | |||| | | | Sbjct 453448 AAGGACCCGCAAGAGCGAGACCGCCTATTTGACGCCATCGAGACAATACCGTGCATCAAG 453389 Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCG 1456179 || ||||| || ||||| | ||||| |||| | || | | ||||| | Sbjct 453388 AAGAAGGCGGATTGGGCTCTCCGCTGGATATCGGACAA-GCGGTC----AAGTTTTGCTG 453334 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCC 1456237 |||| || || | ||| ||||| |||||||| ||||| ||||| ||| || ||| ||| Sbjct 453333 AGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTATCTTCTTCTCCGGCTCATT-TGCTGCC 453275 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||| ||||||||||| ||||||||||| || Sbjct 453274 ATATTTTGGCTTAAGAAGCGCGGGCTCATGCCCGGGCT 453237 Score = 122 bits (134), Expect = 1e-21 Identities = 151/200 (76%), Gaps = 10/200 (5%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||||||| || ||||||||||||||||| || || || |||||||||| Sbjct 455730 CTAATCGGCATGAACGCGACA-CTCATGTGCCAGTACATCGAGTTC-GTTGCCGACCGCC 455787 Query 1456643 TGCTCGCGGCGCTCGGCTG---CGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | |||| |||||||| || || || | || || | || ||||| ||| | Sbjct 455788 TTCTCGTCGCGCTCGG-TGACCCGAAGGTGTACAACGTGTCG---AACCCCTTCGACTTC 455843 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTAC 1456758 ||||| ||||||||||| |||| ||||||||||| |||||| || || ||| ||| Sbjct 455844 ATGGACATGATCTCGCTCCAGGGGAAGACCAACTTCTTCGAGAAGCGTGTCTCCGACTAC 455903 Query 1456759 GCCAAGGCCGGCGTCACCGC 1456778 |||||||| || |||| ||| Sbjct 455904 GCCAAGGCGGGTGTCAACGC 455923 Score = 102 bits (112), Expect = 1e-15 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 |||||||||||||||||||| || ||| ||||||||||| || || ||| ||||||||| Sbjct 453014 GCGCTCATCGGCATGAACGC-ACAGCTGATGTGCCAGTATATCGAGTTT-GTCGCCGACA 452957 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | ||| | | |||| || || | || || |||| | | || ||||| | Sbjct 452956 GACTGTTGGTATCGCTAGGGAACGCAAAA-CATTACCATGCAACAAATCCGTTTGATTTC 452898 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTAC 1456758 ||||| |||| ||||| |||| ||||||||||| |||||| ||||| ||| ||| Sbjct 452897 ATGGACATGATTTCGCTTCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTCTCCGACTAC 452838 Query 1456759 GCCAAGGCCGGCGT 1456772 || ||||| || || Sbjct 452837 GCTAAGGCGGGAGT 452824 >seq143 Length=661151 Score = 107 bits (118), Expect = 3e-17 Identities = 175/249 (70%), Gaps = 16/249 (6%) Strand=Plus/Plus Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATT---GA 263228 |||| ||||||| ||| |||||| || |||||| | || || || ||| || Sbjct 574331 CGATGTCAAGGCGATCTACAAGACGGTCTGGGAGAT---CAGCCAAAAGAAAATTCTCGA 574387 Query 263229 TATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCT--- 263285 ||||| |||||||| | | | | | |||||||| ||| ||||| || |||| Sbjct 574388 CATGGCTGCCGACCGTGGGGCGTTCATTGACCAGAGTCAGAGCCTCAATGTGCACCTGCA 574447 Query 263286 --CGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGC 263343 ||||||| ||||| | || | ||| |||||| ||| | |||| ||| Sbjct 574448 GTCGCCGAC--GACGGGCCAGT---TGACGAGCATGCACTTCTACGGGTGGAAGAAGGGC 574502 Query 263344 CTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACC 263403 |||||||| ||||||||||| ||||||||||| |||||||| | || || || |||||| Sbjct 574503 CTCAAGACAGGCATGTACTACCTGCGCACCCGCCCCGCTGCACAGGCTATCCAGTTCACC 574562 Query 263404 GTCGATCAG 263412 ||||| ||| Sbjct 574563 GTCGACCAG 574571 Score = 86.0 bits (94), Expect = 9e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 262420 CAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGAA 262479 |||||| || ||| | ||||| || || ||||||| | |||||||| || | || || Sbjct 573681 CAACCTGAACCGTATCATTGATATCAACTACTACCCCATCCCCGAGGCTCGTCGATCCAA 573740 Query 262480 TCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACG 262526 ||||||| || ||||| || |||| ||||||||||||||||||| Sbjct 573741 CATGCGCCACCGTCCGATCGGTATCGGTGTGCAGGGCCTCGCCGACG 573787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177789401884612