Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 seq57 129 5e-25 seq199 120 3e-22 >seq1 Length=2270075 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593 |||| ||| |||||| || ||||||||||||| || || || | || || |||||| Sbjct 786402 TGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCGAGCTGC 786461 Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 || |||||||| ||||| |||||||| || | |||| | |||||||||| |||||| Sbjct 786462 TTGCCCGCAAAGATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 786521 Query 35654 TGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTC 35713 ||||| | | | | ||||||| ||| || ||||| | |||||| || || ||||| Sbjct 786522 GCCTTCACATTATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTGCCCGTG 786581 Query 35714 AAAGTTTTCACAAATATCTGCAT 35736 | || || ||||| |||||||| Sbjct 786582 AGTGTCTTGACAAAGATCTGCAT 786604 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| ||||| |||||| || || |||||||| | | ||| || |||| || Sbjct 785658 CACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCCTC 785717 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||| | ||| | || ||||||||| Sbjct 785718 AAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 785777 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||||| ||| || || || Sbjct 785778 AATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTCTT 785837 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||| |||||||| |||||||| Sbjct 785838 CCCGGTGAGAGTCTTCACAAAGATCTGCAT 785867 Score = 104 bits (114), Expect = 2e-17 Identities = 152/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | ||| |||||| || ||||||||||| | | || | |||| || Sbjct 785430 ACCAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTC 785489 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| |||||||| || | || ||||| |||| ||| | | ||||||||| Sbjct 785490 CAGCTGCTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTG 785549 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||||| |||| | | ||||| || || ||||| | |||||||| | Sbjct 785550 AATCTTCGCCTTCA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCT 785608 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || ||||| ||||| || || |||||||| Sbjct 785609 TGCCAGTCAATGTTTTGACGAAGATCTGCAT 785639 >seq57 Length=802683 Score = 129 bits (142), Expect = 5e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| |||||||| || || | | || || |||| ||||||||||| || Sbjct 363389 GTACTCTCCTTCTGAATGTTATAGTCCGAGAGAGTACGACCGTCTTCCAGCTGCTTGCCA 363330 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || ||||| ||||||||||| | |||| || ||||| ||| ||||| ||| Sbjct 363329 GCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCTTCCTTATCCTGAATCTTCGCCTTG 363270 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| ||| || ||||| | |||||||| || ||||||||||| Sbjct 363269 ACATTGTCGATGGTGTCAGACGACTCGACCTCGAGAGTGATCGTCTTGCCCGTCAAAGTC 363210 Query 35720 TTCACAAATATCTGCATTC 35738 ||||| || |||||||||| Sbjct 363209 TTCACGAAAATCTGCATTC 363191 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 ||| | ||| |||||||| || |||||||| |||| | |||||| |||| || ||||| Sbjct 363118 ATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTG 363059 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||||| || || ||||| ||||| ||||||| ||| | || ||||||||| |||| | Sbjct 363058 CTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC-T 363000 Query 35653 TTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 | || | | |||| | | |||||| || || ||||| | || || || || || | Sbjct 362999 TCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTG 362940 Query 35712 TCAAAGTTTTCACAAATATCTGCAT 35736 ||| ||| || || || || ||||| Sbjct 362939 TCAGAGTCTTGACGAAGATTTGCAT 362915 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || ||||| || || ||||||||||||| | || || |||| || |||||||| || Sbjct 362553 GTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGCTTGCCA 362494 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | |||||||| |||| |||| | |||||||||| ||||||| |||| Sbjct 362493 GCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTTGCCTTC 362434 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| || ||||| || | |||||| || || || || | || Sbjct 362433 ACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCAGTAAGGGTC 362374 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 362373 TTGACGAAGATCTGCAT 362357 >seq199 Length=104010 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| |||||||| || || | | || || | || ||||||||||| || Sbjct 100879 GTACTCTCCTTCTGAATGTTATAGTCCGAGAGCGTACGACCATCTTCCAGCTGCTTGCCA 100820 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||||||||| | |||| || |||||||| |||||| ||| Sbjct 100819 GCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTG 100760 Query 35660 AGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | ||||| ||| || || || | |||||||| || ||||||||||| Sbjct 100759 AC-GTTGTCGATGGTGTCAGACGACTCGACTTCGAGAGTGATCGTCTTGCCCGTCAAAGT 100701 Query 35719 TTTCACAAATATCTGCATTC 35738 ||||| || |||||||||| Sbjct 100700 CTTCACGAAAATCTGCATTC 100681 Score = 113 bits (124), Expect = 4e-20 Identities = 154/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | ||| |||||||| ||||||||||| || | | |||||| |||| || Sbjct 100614 ACCAAGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTC 100555 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||| ||||||| ||| | || ||||||||| Sbjct 100554 GAGCTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTG 100495 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||| || || | | |||| | | |||||| || || ||||| | || || || | Sbjct 100494 GATC-TTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCT 100436 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 100435 TTCCTGTCAGGGTCTTGACGAAGATTTGCAT 100405 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || ||||| || || ||||||||||||| | || || |||| || |||||||| || Sbjct 100045 GTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGCTTGCCA 99986 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | |||||||| |||| |||| | |||||||||| |||||| |||| Sbjct 99985 GCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 99926 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| || ||||| || | |||||| || || || || | || Sbjct 99925 ACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGCCAGTAAGGGTC 99866 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 99865 TTGACGAAGATCTGCAT 99849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792326508080