Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 seq199 111 2e-19 seq57 109 6e-19 seq150 93.3 4e-14 seq146 86.0 6e-12 >seq1 Length=2270075 Score = 113 bits (124), Expect = 5e-20 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCG 134564 ||||||| |||||||| ||||| || ||||||||||| | || || | | ||| || Sbjct 786169 CGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCG-TACGGCCGTCTTCC 786227 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| |||||||||||||||| ||||||||||| || || ||||| || || || ||| Sbjct 786228 AACTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGA 786287 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||| || || || || ||||| || || || Sbjct 786288 ATCTTAGCCTTAACATTGTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATAGTCTTT 786347 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || || || || ||||| Sbjct 786348 CCCGTGAGAGTCTTGACAAAGATCTGCAT 786376 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||||||||| || || ||||| || |||||||| ||| | || || || ||| Sbjct 786396 ACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCG 786455 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| ||||| |||||||||||||| || || || || || || || Sbjct 786456 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGG 786515 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||||||||| || || ||||| || || || || Sbjct 786516 ATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTG 786575 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || || || ||||| Sbjct 786576 CCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 ||||| || ||||| || ||||| || ||||||||||| | |||| || | || || Sbjct 785887 ACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAAC-GTCCGGCCATCTTC 785945 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || || || || || | || |||||||| || || || || || || || || Sbjct 785946 GAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTG 786005 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||| || || || ||| | ||||| || || || || ||||| || || || || Sbjct 786006 AATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTCTT 786065 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | || |||||||| || |||||| Sbjct 786066 GCCCGTGAGGGTCTTAACGAAGATCTGCATT 786096 >seq199 Length=104010 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || |||||| ||||| |||||||||||||| | || | ||| |||||| Sbjct 100610 AGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGC 100551 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || ||||||||||| || || || || |||||||| || || || || Sbjct 100550 TGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC 100491 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | ||||||||| || || || || || ||||| || || || Sbjct 100490 TTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCT 100431 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || ||||| |||||||| Sbjct 100430 GTCAGGGTCTTGACGAAGATTTGCAT 100405 >seq57 Length=802683 Score = 109 bits (120), Expect = 6e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || |||||| ||||| || |||||||||||| | || | ||| || | Sbjct 363122 CGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTA 363063 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| || || || || ||||||||||| || || || || |||||||| || || || | Sbjct 363062 GCTGCTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGA 363003 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || || || ||| | ||||||||| || || || || || ||||| || || | Sbjct 363002 TCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTC 362943 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | ||| || ||||| |||||||| Sbjct 362942 CTGTCAGAGTCTTGACGAAGATTTGCAT 362915 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| || ||| || || || |||||||| ||| | || | ||| || | Sbjct 362564 CGAGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTA 362505 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| ||||| || || || | ||||||||||| || || || || || || || || | Sbjct 362504 GCTGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGA 362445 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | ||| || || ||| | ||||| || || ||||| ||||| || ||||| || | Sbjct 362444 TCTTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGC 362385 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || ||||| || ||||| Sbjct 362384 CAGTAAGGGTCTTGACGAAGATCTGCAT 362357 >seq150 Length=1432513 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 21718 AGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTG 21777 ||||| ||||||| |||||||| |||||||||||| |||| |||||| |||||| Sbjct 453177 AGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTC 453236 Query 21778 AGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaa 21837 || |||||||| | || || || |||| |||| || || ||||| ||||| || Sbjct 453237 AGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAG 453296 Query 21838 aaCACGCCCTCCACAATGGCGAACGCCAC 21866 || | ||||| || |||||| ||||| Sbjct 453297 AAGATACCCTCGACTGCGGCGAAGGCCAC 453325 >seq146 Length=609471 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| ||||| |||||||||||||||| | |||| | Sbjct 163661 AGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGT 163720 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||| || ||||| |||||||| || |||| |||||||| || || || |||| Sbjct 163721 CCGTCCTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGC 163775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396972249520