Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq150 118 1e-21 >seq150 Length=1432513 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 39637 GCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTT 39696 ||||||||| | || || | ||||| || || ||||| || ||||| ||||||||||| Sbjct 455548 GCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGACCACGCTT 455489 Query 39697 TTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756 |||||||| ||||||| ||||| |||||||| |||||||| || || ||||| || || Sbjct 455488 CTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAGATACCCTCGACTGCAGCGAA 455429 Query 39757 TGCAACAAGTCTCTC 39771 || || |||| ||| Sbjct 455428 GGCCACCAGTCGCTC 455414 Score = 113 bits (124), Expect = 6e-20 Identities = 257/386 (67%), Gaps = 3/386 (1%) Strand=Plus/Plus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || || || || || ||||| || || ||||| || |||||||||||||||||| Sbjct 453222 TCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCA 453281 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778 || || || || |||||||| || || ||||| || || || || |||| ||| | || Sbjct 453282 AATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAA 453341 Query 39779 CTTGTATCATTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGC 39835 |||| || | |||||| | |||||||| || |||||||| | || || Sbjct 453342 CTTGACCGCTTGTCCGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGT 453401 Query 39836 ATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCT 39895 ||||| || || || | ||| || | | || | || || | || || || Sbjct 453402 ATTGTCTCGATGGCGTCAAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCG 453461 Query 39896 ATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAA 39955 || | ||| ||| | || ||||| ||||| || ||| || || || || || ||| Sbjct 453462 ATGAGCAGCGAATATGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAA 453521 Query 39956 CATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACT 40015 |||| ||| || | | ||| || || | || | || | | || || |||||| Sbjct 453522 CATCGTGCCTCCGCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACT 453581 Query 40016 ATTCCATCACTAGCGGCAAAAAATGC 40041 || ||||| ||||| || ||||| Sbjct 453582 ATGCCATCGGAGGCGGCGAAGAATGC 453607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906859482640