Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq150 116 3e-21 >seq150 Length=1432513 Score = 116 bits (128), Expect = 3e-21 Identities = 275/412 (67%), Gaps = 5/412 (1%) Strand=Plus/Minus Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 ||| || ||||| || || || | || || || || | ||||| ||| | || Sbjct 453590 CGATGGCATAGTGAACGAGAACCTTGTCGAGCGCTTCTCGAATGAAGTGCAAGCTGCGGA 453531 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||||||||||| ||||| || ||||| || || || |||||||| || | || Sbjct 453530 GGCACGATGTTTCTATGGCTTCCAAATAATGATGGAGAACATTCATTCCGAGACATATTC 453471 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGAT 44052 || || || || ||||||||||| || ||| ||| | || | ||| | || || Sbjct 453470 GCTGCTCATCGACACGTACATCAAGGACCCGCAAGAGCGAGACCGCCTATTTGACGCCAT 453411 Query 44053 AGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111 || ||| |||| ||| || || | || || || ||||| || |||||| | Sbjct 453410 CGAGACAATACCGTGC-ATCAAGAAGAAGGCGGATTGGGCTCTCCGCTGGATATCGGACA 453352 Query 44112 ATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 | || ||||| || ||||| || || || || | || || || || ||||| | Sbjct 453351 AGCGGTCAAGTTTTGCTGAGCGACTAGTGGCCTTCGCCGCAGTCGAGGGTATCTTCTTCT 453292 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 | || || ||||| |||||||||||| | ||||| || || | ||||| ||| |||||| Sbjct 453291 CCGGCTCATTTGCTGCCATATTTTGGCTTAAGAAGCGCGGGCTCATGCCCGGGCTGACGT 453232 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | || || ||| | |||| || || || || | || ||||||||| || Sbjct 453231 TCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGATTTTGCATG 453180 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179 |||| || ||||| || || || || | || || || || ||||| || ||||| ||| Sbjct 455408 TTTGCTGAGCGACTGGTGGCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTT 455467 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 ||| ||||||| ||| | ||||| || ||| | ||||| || | ||||| || || ||| Sbjct 455468 GCGTCCATATTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACGTTCTCGAACGAG 455527 Query 44240 TTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 | || || |||||||| ||| | || ||||||||||||| || Sbjct 455528 CTCATCAGCCGTGATGAGGGCATGCACACCGATTTTGCTTGCCTG 455572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454905257130