Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 seq57 86.0 5e-12 seq199 82.4 6e-11 >seq1 Length=2270075 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| ||| | || | ||| | ||| || || || || || ||||||||| Sbjct 785867 TGCCACCGCGCAGCCGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 785926 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | ||||||||||| || || ||| | || || || || |||||||| | Sbjct 785927 ACAACGTCCGGCCATCTTCGAGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAG 785986 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| || || ||||| |||| | | || | ||||| | | || | Sbjct 785987 GAATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGA 786046 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || || | |||||||| || || || || ||||| ||||| Sbjct 786047 CTTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 786095 >seq57 Length=802683 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||| | | ||| ||||||| ||||| ||||| ||| | Sbjct 363105 TCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGCTGCTTACCAGCGAAG 363046 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||||||| ||||| || | || || || || |||||| || | | | Sbjct 363045 ATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTTG 362986 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || |||| || || |||||||| || || Sbjct 362985 TCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGAGTCTTGACG 362926 Query 27237 AAGATTTGCATA 27248 |||||||||||| Sbjct 362925 AAGATTTGCATA 362914 >seq199 Length=104010 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 27038 TACCAA-ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTT 27096 |||||| ||| | ||| || || ||||| |||||||| | | ||| |||||| Sbjct 100615 TACCAAGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTT 100556 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 ||||||| || || ||| | || | ||||||||| ||||| || | || || || || Sbjct 100555 CGAGCTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCT 100496 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 |||||| || | | | || | ||||| | | || || || || || |||| | Sbjct 100495 GGATCTTCGCCTTAACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCT 100436 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || ||||| || || || |||||||||||| Sbjct 100435 TTCCTGTCAGGGTCTTGACGAAGATTTGCATA 100404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933229571312