Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq150 82.4 1e-10 >seq150 Length=1432513 Score = 82.4 bits (90), Expect = 1e-10 Identities = 171/251 (68%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | |||||||| ||| || || || || ||||| || || Sbjct 455565 GCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCG 455506 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | ||| | || | |||| || || || ||||||||||| Sbjct 455505 GGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCA-AAGGATCCAGAGAAGAAGAT 455447 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAG---GAGCGAGACTTTGCATC 122834 |||||| || || || || | || || || || ||| || || ||| || | Sbjct 455446 ACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCG---CTTGTCAGC 455390 Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 122894 | ||| | ||||| | ||||||||||| || || || | || | |||||| || Sbjct 455389 GATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATC 455330 Query 122895 AAATAACTGCT 122905 |||| |||| Sbjct 455329 GAATAGGTGCT 455319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030225809600