Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq150 132 6e-26 seq144 104 3e-17 >seq150 Length=1432513 Score = 132 bits (146), Expect = 6e-26 Identities = 351/526 (67%), Gaps = 19/526 (4%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| |||||| |||||| || |||||||| || || Sbjct 455565 GCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCG 455506 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| |||||||| | |||||| || | ||| || |||||||||||||| Sbjct 455505 GGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAGATA 455446 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGGGACTTTGTATCA 130192 ||||| || ||||| || | || |||||||||||| || || ||| | | Sbjct 455445 CCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCG---CTTGTCAGCG 455389 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | ||||| | |||||| |||| ||| || |||| ||| | ||| || || Sbjct 455388 ATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCG 455329 Query 130253 AAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 || || | || | | || | || || |||||||| | || ||||| || || || Sbjct 455328 AATAGGTGCTCGCGCTGCTTA-GGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACGT 455270 Query 130312 TTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 130370 ||| |||| | | ||| || ||| | |||||||| ||||||| || Sbjct 455269 CTCGGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCG 455211 Query 130371 TCTGTACCTCATCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACC 130427 ||||||||| | || | || | | || | ||||| || || || ||||| Sbjct 455210 CCTGTACCTCGT-TGGAGAAACG--CTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAG 455154 Query 130428 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 130484 | || || || || |||| || ||||| | | || || ||||||| || | | Sbjct 455153 CGGCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGT 455094 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||||| || ||||| ||||| || | |||||| | ||||| Sbjct 455093 TCCAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCA 455048 Score = 114 bits (126), Expect = 2e-20 Identities = 211/304 (69%), Gaps = 8/304 (3%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| ||| || || || || ||||| ||| || Sbjct 453183 GCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAGCCCG 453242 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||| | ||| || || ||| ||||||||| ||||||||||| Sbjct 453243 GGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAAGATA 453302 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGAC--TTTGTATCA- 130192 ||||| || ||||| || | || |||||||||| | | ||| |||| | Sbjct 453303 CCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAA---AACTTGACCGCTTGTCCGAT 453359 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | ||||| | |||||| |||| ||| ||||| | |||| ||| || ||| Sbjct 453360 ATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTCA 453419 Query 130253 AAGAGTTCCTTCT-TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 || || | ||| ||| || || ||||||||| | || ||||| |||||||| Sbjct 453420 AATAG-GCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGT 453478 Query 130312 TTCG 130315 ||| Sbjct 453479 CTCG 453482 >seq144 Length=659063 Score = 104 bits (114), Expect = 3e-17 Identities = 207/306 (68%), Gaps = 12/306 (4%) Strand=Plus/Plus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||||||||| | ||| ||||| ||||| |||||| ||| || | || ||||| Sbjct 533117 ATCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTT 533176 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGC 179927 || || | || | ||||||||||| | | || ||||| || ||| ||| | Sbjct 533177 GTGCTGCAAGCCAAGGATCTTCTTGATGTTCTGGATCTCTTCATTCTTCATGATCTGCTC 533236 Query 179928 CACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATC 179987 ||| || ||||| || ||| ||||| ||||||||||| ||| | | || Sbjct 533237 GTGCTTAGCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTGTC 533296 Query 179988 ACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCAC 180047 ||||| || || ||||||||| || ||||| | ||| ||||| || || || || | Sbjct 533297 GCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTGAG 533356 Query 180048 GATGAGCGTACACTTTCCAGATTGTGCC------GTCCCTGCCTTGTTCGCGTCGTCCAA 180101 ||| ||||| || |||| |||||| ||||| || ||||| |||||| ||| Sbjct 533357 GATCAGCGTGCA--TTCC----TGTGCCTTCCGGGTCCCAGCGTTGTTAGCGTCGGACAA 533410 Query 180102 CTTGGG 180107 |||||| Sbjct 533411 CTTGGG 533416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433452920560