Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq150 131 2e-25 seq144 105 8e-18 seq143 104 3e-17 >seq150 Length=1432513 Score = 131 bits (144), Expect = 2e-25 Identities = 183/251 (73%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| || || || |||||| | || | || || || | ||||| ||||| |||||| Sbjct 455319 AGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCGGACTGGGCTC 455378 Query 94769 TGAAGTGGTTTGAT-ACAAA--GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | ||| | | | |||| |||| | ||||||||||||||| | || || || Sbjct 455379 TCCGCTGGATCGCTGACAAGCGGTCGAG---CTTTGCTGAGCGACTGGTGGCCTTCGCTG 455435 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 94884 || |||||||||||||||||||| ||||| |||| | || | |||||||||||||| Sbjct 455436 CAGTCGAGGGTATCTTCTTCTCTGGATCCTT-TGCGTCCATATTCTGGCTCAAGAAGCGT 455494 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||||||| || ||| ||||| |||||||| ||| ||||| ||||| | ||| Sbjct 455495 GGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGCATGCAC 455554 Query 94945 CAAGAGTTTGC 94955 || ||||| Sbjct 455555 ACCGATTTTGC 455565 Score = 122 bits (134), Expect = 1e-22 Identities = 178/246 (72%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 || ||||| |||||| | ||| | ||||| || | ||||| |||||||||||| | Sbjct 453424 CTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGATTGGGCTCTCCGC 453365 Query 94774 TGGTT-TGATACAAA--GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | | |||| ||| ||| ||||||||||||| | || || || || Sbjct 453364 TGGATATCGGACAAGCGGTCAAGTT---TTGCTGAGCGACTAGTGGCCTTCGCCGCAGTC 453308 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||||||||||||||| || || || ||| || || | |||||| |||||||| || || Sbjct 453307 GAGGGTATCTTCTTCTCCGGCTCATT-TGCTGCCATATTTTGGCTTAAGAAGCGCGGGCT 453249 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 94949 |||||| || || |||||||||||||| || || ||||||||| | ||| || Sbjct 453248 CATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGGAATGCACACCGA 453189 Query 94950 GTTTGC 94955 ||||| Sbjct 453188 TTTTGC 453183 >seq144 Length=659063 Score = 105 bits (116), Expect = 8e-18 Identities = 179/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260 ||||||||| | |||||| || ||||| |||||| ||| || | |||||||| Sbjct 533117 ATCCGTCATCAACATGAGCCGTCCATAACGAAGCCCGGCTGTGTCCTTGTAGTCCTTGTT 533176 Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTG--T 169318 || || | || | ||||||||||| | | || ||||| || ||| ||| Sbjct 533177 GTGCTGCAAGCCAAGGATCTTCTTGATGTTCTGGATCTCTTCATTCTTCATGATCTGCTC 533236 Query 169319 GTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGA 169378 ||| | | || ||||| || ||| ||| ||||| |||||||| || ||| | | Sbjct 533237 GTG-CTTA-GCGTCGCGGACGTTCAGTAGCTTTCCACGCAGAGGGAACACGCCGAAATTG 533294 Query 169379 TCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTG 169438 || ||||| || ||| |||||| ||||| ||||| | ||| || ||||| || |||||| Sbjct 533295 TCGCGACCGACAACGCTGAGACCAGCGACGGCGAGCGACTTGGCGGAGTCTCCTTCGGTG 533354 Query 169439 ACGATGAGCGTACATT 169454 | ||| ||||| |||| Sbjct 533355 AGGATCAGCGTGCATT 533370 >seq143 Length=661151 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 |||||||| || | ||| |||||||| |||| ||||| |||| | | | || || || Sbjct 572947 GGGACAAACGGATACTCAAATGGTATTGTTCCCATGCTACGCGCGTATGATGCAACCGCC 573006 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628 || ||||| | |||| ||| | | | | || | |||| |||| || ||||| Sbjct 573007 CGGTATGTCGACCAAGGTGG-CAACAAGCGCCCCGGTGCATTCGCTATCTACCTAGAGCC 573065 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||| | || ||| | ||||||||||| | || ||||| ||| | ||||||| Sbjct 573066 ATGGCATGATGACATCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGTAAGGAGGAGGT 573125 Query 104689 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 | |||| ||||| || |||| ||| || |||||||| |||||||| Sbjct 573126 TC-GTGCTCGCGACCTATTCTACGCACTTTGGATTCCCGATCTCTT 573170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259152288240