Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq183 118 9e-22 >seq183 Length=1202715 Score = 118 bits (130), Expect = 9e-22 Identities = 191/272 (70%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 30246 ||||| || || ||| ||| | |||||| || | || ||| ||||||| || ||||| Sbjct 46801 AGCTGGTCGACGCCCTGCCCGGTGTAGTCCGCGTCGCA-GTCTGTGTACTTCGCGCCGAA 46859 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||||||||||||| || |||||||| ||||||||||| ||| ||| ||| | | || Sbjct 46860 GTGCCTCCACTGGAAGCCATACACCGGGCCCAGGTCTCCTTCTCTCCTATGCCCCAGTCC 46919 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 | ||| || | || || || || || | ||||| ||||| | |||||| | || Sbjct 46920 ACGCTTCTCGAGGAATTCCTTGCTCCCATTCCCATCCCAAATCTTGATGCCCTTCGCGGA 46979 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30426 || ||||| | || || || | || |||||| ||||| ||||||| | | Sbjct 46980 CAGAAGCTTGGAATCAGTCGAGCCGCGGATGAACCATAGCAGTTCCTCCAGAATACCGCG 47039 Query 30427 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458 |||||| | ||| |||||||| || |||| Sbjct 47040 CCAAAATGTGCGCTTTGTCGTGAGAAGAGGAA 47071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309280868792