Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq150 125 6e-24 >seq150 Length=1432513 Score = 125 bits (138), Expect = 6e-24 Identities = 308/464 (66%), Gaps = 10/464 (2%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| |||||||| |||| || ||||| | | | ||||| ||||| || ||||| | Sbjct 453179 ACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAG 453238 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 |||||||| | || | ||| |||||||||||||| || |||||||| || || ||||| Sbjct 453239 CCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAA 453298 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCG-GGACCCGAACGAGCTGGCTTTGTCTT 4725 || || || || ||||| || || |||| ||| | | ||| | || ||||| Sbjct 453299 GATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGC-TTGTCCG 453357 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 ||||| | ||||| | || || ||||| | |||||| ||||| | || |||| Sbjct 453358 ATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGT 453417 Query 4786 TAAATA----ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841 ||||| | | | || | ||||| | || || ||||| || || || | Sbjct 453418 CAAATAGGCGGTCTCGCTCTTGC----GGGTCCTTGATGTACGTGTCGATGAGCAGCGAA 453473 Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 || | || ||||| || || || || || || || || || || |||| || || Sbjct 453474 TATGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCC 453533 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | |||| ||||| || | || | || || | ||| ||||| ||||| || || | Sbjct 453534 GCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAG 453593 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTC 5005 || || || || || | || || || || |||| | | ||||| Sbjct 453594 GCGGCGAAGAATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTC 453637 Score = 109 bits (120), Expect = 5e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 4262 GTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCAT 4321 ||| ||||| || ||||| |||||||| || || || || | | |||||| | ||||| Sbjct 452838 GTAGTCGGAGACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGAAGCGAAATCATGTCCAT 452897 Query 4322 AAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCG 4381 |||||||||||||| ||||| | |||||||||| | | ||| | ||| | || || Sbjct 452898 GAAATCAAACGGATTTGTTGCATGGTAATGTTTTGCGTTCCCTAGCGATACCAACAGTCT 452957 Query 4382 GTCAGCTACAAATTCTATATACTGGCTCATGAG 4414 ||| || ||||| || |||||||||| ||| || Sbjct 452958 GTCGGCGACAAACTCGATATACTGGCACATCAG 452990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048423745258