Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq150 114 2e-20 >seq150 Length=1432513 Score = 114 bits (126), Expect = 2e-20 Identities = 363/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || |||||||| || | || ||||| | || || | ||||| || || ||||| Sbjct 455568 CAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGG 455509 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 |||||||| || ||||| || |||||||| ||||| | ||| || |||||||| ||||| Sbjct 455508 CCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAG 455449 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--- 48317 || || || || || || || || |||| ||| | | || | |||| Sbjct 455448 ATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGTCAGCG 455389 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || | ||||| || ||||||||||| | || || || || || || |||| Sbjct 455388 ATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCG 455329 Query 48378 AAGAGAAAGtttttttCATTGCT----ATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 | | || | | | |||| || || | ||| || || || | || || Sbjct 455328 A----ATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTA 455273 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 | | |||||||| || || || || ||||| || ||||| ||||| | ||| || | Sbjct 455272 CGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGC 455213 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 ||||||||| | | || || || | | ||||| || || || || || ||| Sbjct 455212 CGCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGC 455153 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATT 48610 || || || || | ||||| || || | | |||||| ||| | || || Sbjct 455152 GGCGAAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTT 455093 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 |||||| | || || || || | || | || || | ||||| ||||| ||||| || Sbjct 455092 CCAGTCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGC 455033 Query 48671 TTTTTTATACATATTCCATAT 48691 || || ||||| | ||| || Sbjct 455032 CTTCTTGTACATCTGCCAGAT 455012 Score = 95.1 bits (104), Expect = 2e-14 Identities = 356/553 (64%), Gaps = 14/553 (3%) Strand=Plus/Plus Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 |||||||||||| || | || || || | | || | ||||| || || || || Sbjct 453179 ACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAG 453238 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 |||||||| || || || || || ||||||||||| || || || || || || ||||| Sbjct 453239 CCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAA 453298 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 || || || || || || || || |||| ||| | |||| | |||| Sbjct 453299 GATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTCCGA 453358 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 |||||| || | |||||||| ||||||||||| | || || ||||| || || || | Sbjct 453359 TATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTC 453418 Query 48377 AAAGAGAAAGtttttttCATTGC-TATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 ||| || || | || |||| || || | ||| || || || | || ||| Sbjct 453419 AAATAGGCGGTCTCGCTC-TTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATG 453477 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 | ||||| ||||| || || || || || || || || ||||||| || || | Sbjct 453478 TCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGCAG 453537 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 || || || | | || || || | | ||||| || ||||| ||||| || | Sbjct 453538 CTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAGGCGG 453597 Query 48556 CAAAAAATGCTAATACATGTTTAATAAA------ATATTTTTCGTTGGAAGTCAGTTTAT 48609 | || ||||| | || || || || | | |||||| || | | | | Sbjct 453598 CGAAGAATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTCGTCGTTG--AGGC-GATGGT 453654 Query 48610 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTG 48669 ||||||| | || | ||| | |||| ||||| |||||||| || |||||||| | Sbjct 453655 TCCAGTCCCAGTGGTCGTGTGAAAGGTCTATCTCTTCCGCTGTCCAGAAAGATGCCTCGG 453714 Query 48670 CTTTTTTATACAT 48682 ||| || ||||| Sbjct 453715 CTTGCTTGTACAT 453727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666837560640