Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq150 120 4e-22 >seq150 Length=1432513 Score = 120 bits (132), Expect = 4e-22 Identities = 363/551 (66%), Gaps = 10/551 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 |||||||||||| || | || || || | | || | ||||| || || || || Sbjct 453179 ACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGTCAG 453238 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 ||| ||||| || || ||||| || ||||||||||| || || || || || || ||||| Sbjct 453239 CCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAAGAA 453298 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC-TGGCATCAT-TATGA 46806 || || || || || ||||| || || |||| ||| | ||| || | | | | || Sbjct 453299 GATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTCCGA 453358 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | |||||||||| ||||| ||||| | || || ||||| || || || | Sbjct 453359 TATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGCGTC 453418 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 ||| || || | || | || || | || || || || | || ||| | Sbjct 453419 AAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATATGT 453478 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || ||||||||||| || || || || || || || ||||||| ||| || | | Sbjct 453479 CTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGCAGC 453538 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044 || || || | | || || || ||||| ||||| |||||||| ||||| || | Sbjct 453539 TTGCACTTCATTCGAGAAGCGCTC-GACAAGGTTCTCGTTCACTATGCCATCGGAGGCGG 453597 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTC 47100 | || ||||| | || || || || | || ||| || || | | | ||| Sbjct 453598 CGAAGAATGCGAGGACGTGCGAGATGAAGTGCCGCTCGTCGTCGTTGAGGC-GATGGTTC 453656 Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCT 47160 ||||| | || | ||| | |||| ||||| ||||||||||| || ||||| ||| Sbjct 453657 CAGTCCCAGTGGTCGTGTGAAAGGTCTATCTCTTCCGCTGTCCAGAAAGATGCCTCGGCT 453716 Query 47161 TTTTTATACAT 47171 | || ||||| Sbjct 453717 TGCTTGTACAT 453727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932385960320