Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq57 159 2e-34 seq199 154 1e-32 seq1 138 8e-28 seq145 89.7 4e-13 >seq57 Length=802683 Score = 159 bits (176), Expect = 2e-34 Identities = 161/207 (78%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || |||||||||||||| ||||||||||| |||| ||| ||| |||| || ||| Sbjct 363120 AGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTTCGCCCGTCTTCTAGC 363061 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || |||||||||||||| || || | ||| | |||||||| ||| ||| Sbjct 363060 TGCTTACCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC 363001 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| ||| || ||| | || ||||||| || || ||||| | ||||| |||||||| Sbjct 363000 TTCGCCTT-AACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCC 362942 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| |||||||||||||| Sbjct 362941 TGTCAGAGTCTTGACGAAGATTTGCAT 362915 Score = 143 bits (158), Expect = 2e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| |||||||| || |||||||||||||||| ||| || |||| || ||| Sbjct 362562 AGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGC 362503 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || ||||| | ||||||||||| | || | ||| ||||| ||| ||| Sbjct 362502 TGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATC 362443 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||||| | | |||||||| | || ||||| || | ||| || ||||| || Sbjct 362442 TTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCA 362383 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| |||||||| |||||| Sbjct 362382 GTAAGGGTCTTGACGAAGATCTGCATG 362356 Score = 131 bits (144), Expect = 1e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| || || |||||||| || ||||| || || | ||| || |||| Sbjct 363405 CAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGAGTACGACCGTC 363346 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| || || |||||||| |||||||| || | || | |||||||| || Sbjct 363345 TTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCTTCCTTATC 363286 Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 | |||||| ||| || ||| | |||||||| | || || ||||| | || ||| Sbjct 363285 CTGAATCTTCGCCTTGACATTGT--CGATGGTGTCAGACGACTCGACCTCGAGAGTGATC 363228 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | ||||||||||| || ||||| Sbjct 363227 GTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 363193 Score = 127 bits (140), Expect = 1e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| |||||||| ||||||||||| |||||||| || |||| || ||| |||| | Sbjct 362843 CACCGAGGTGAAG-GTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCT 362785 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| || |||||||||| || ||||| || | || | ||| ||||| || Sbjct 362784 CGAGTTGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTT 362725 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| | | | ||||| || | ||||| ||||| | ||||| |||| Sbjct 362724 GAATCTTCGCCTTGACGTTGTCGATGGTATCAGATGATTCGACCTCAAGGGTAATGGTCT 362665 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||| ||||| ||||| || |||||| Sbjct 362664 TGCCCGTGAGCGTCTTGACGAAAATCTGCATG 362633 >seq199 Length=104010 Score = 154 bits (170), Expect = 1e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || |||||||||||||| || |||||||| || | ||| ||| |||| || ||| Sbjct 100610 AGATGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGC 100551 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || |||||||||||||| || || | ||| | |||||||| ||| ||| Sbjct 100550 TGCTTGCCAGCGAAGATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATC 100491 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| ||| || ||| | || ||||||| || || ||||| | ||||| |||||||| Sbjct 100490 TTCGCCTT-AACGTTGTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCC 100432 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| |||||||||||||| Sbjct 100431 TGTCAGGGTCTTGACGAAGATTTGCAT 100405 Score = 145 bits (160), Expect = 5e-30 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181 ||||| || |||||||||||||||||||| |||||||| || |||| || ||| | Sbjct 100339 TCTCACCA--AGGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCC 100282 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 ||| || || ||||| || |||||||||| || ||||| || | || | ||| ||||| Sbjct 100281 GTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTT 100222 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 || |||||| ||| | | | ||||| || | |||||| ||||||| ||||| Sbjct 100221 GTCTTGAATCTTCGCCTTGACGTTGTCGATGGTATCAGAGGATTCGACCTCCAGGGTAAT 100162 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| |||||||| ||||| ||||| || |||||| Sbjct 100161 GGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCATG 100125 Score = 143 bits (158), Expect = 2e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| |||||||| || |||||||||||||||| ||| || |||| || ||| Sbjct 100054 AGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGC 99995 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || ||||| | ||||||||||| | || | ||| ||||| ||| ||| Sbjct 99994 TGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATC 99935 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||||| | | |||||||| | || ||||| || | ||| || ||||| || Sbjct 99934 TTGGCCTTCACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTTGCCA 99875 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| |||||||| |||||| Sbjct 99874 GTAAGGGTCTTGACGAAGATCTGCATG 99848 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| || || |||||||| || ||||| || || | ||| || | || Sbjct 100895 CAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAGAGCGTACGACCATC 100836 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| || || ||||||| |||||||| || | || | |||||||| || Sbjct 100835 TTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTC 100776 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| | | | |||||||| | || || || || | || ||||| Sbjct 100775 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACTTCGAGAGTGATCGT 100716 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | ||||||||||| || ||||| Sbjct 100715 CTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 100683 >seq1 Length=2270075 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| |||||||||||||||| || || | || || Sbjct 786396 ACGAGGTGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCG 786455 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||||||||| ||||||||||| | || | ||| ||||| ||| Sbjct 786456 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGG 786515 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||||| || || ||||| | ||| || ||||| Sbjct 786516 ATCTTCGCCTTCACATTATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTG 786575 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| || ||||| ||||| Sbjct 786576 CCCGTGAGTGTCTTGACAAAGATCTGCAT 786604 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || |||||||| |||||| ||||||||||| |||| | || | || || Sbjct 785887 ACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCTTCG 785946 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||||||||| || ||||| | || |||||||| | ||| | ||| ||||| ||| Sbjct 785947 AGCTGCTTCCCAGCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTGA 786006 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | || || || || | ||| |||||||| Sbjct 786007 ATCTTCGCCTTCACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTCTTG 786066 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||| ||||| Sbjct 786067 CCCGTGAGGGTCTTAACGAAGATCTGCAT 786095 Score = 127 bits (140), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| || | ||| |||||| ||||| |||||||| | ||| || |||| || Sbjct 785658 CACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCCTC 785717 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||||| || ||||| | ||||||||| || | ||| | || ||||| || Sbjct 785718 AAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 785777 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | || || ||||||| |||||| ||| Sbjct 785778 AATCTTTGCCTTGACATTGT--CGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTC 785835 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| |||||||| ||||| |||||| Sbjct 785836 TTCCCGGTGAGAGTCTTCACAAAGATCTGCATG 785868 Score = 127 bits (140), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||||||| |||||| ||||||||||| || | || || |||| |||| | Sbjct 786171 AGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCAAC 786230 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || ||||| |||| ||||||||||| | ||| | || ||||| ||| ||| Sbjct 786231 TGCTTGCCTGCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAATC 786290 Query 44252 TTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 || ||| || ||| | || ||||| | | || ||||||| || || ||||||| Sbjct 786291 TTAGCCTTAACATTGT--CGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATAGTCTTTC 786348 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| ||||| || ||||| ||||| Sbjct 786349 CCGTGAGAGTCTTGACAAAGATCTGCAT 786376 Score = 122 bits (134), Expect = 6e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| || |||||| |||||||||||||| | || | |||| |||||| Sbjct 785434 AGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTCCAGC 785493 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 |||||||| |||||||| | ||| |||||||| | ||| | ||| ||||| || ||| Sbjct 785494 TGCTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTGAATC 785553 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||||| | | |||||||| | || || ||||| | || |||||||| || Sbjct 785554 TTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTTGCCA 785613 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || |||||||| |||||| Sbjct 785614 GTCAATGTTTTGACGAAGATCTGCATG 785640 >seq145 Length=652196 Score = 89.7 bits (98), Expect = 4e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || |||||| |||||||||||||||||||| ||| |||| || Sbjct 199042 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCA 198983 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 |||||||| || || ||||| | |||||||| |||| Sbjct 198982 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTG 198946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989408451442