Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 seq199 141 2e-28 seq57 141 2e-28 >seq1 Length=2270075 Score = 158 bits (174), Expect = 3e-33 Identities = 158/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| | || || || ||||||||||||||||| || || ||| Sbjct 785636 CAGATCTTCGTCAAAACATTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCTTCTGAC 785577 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||| ||||| || || ||||||||||| |||||| Sbjct 785576 ACCATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAGCAA 785517 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || || || ||||| ||| | ||||| ||| || Sbjct 785516 CGTCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGTAGGACGCTTTCGGATTACAACATC 785457 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || ||||||| Sbjct 785456 CAGAAGGAGTCTACCCTTCATCTTG 785432 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| ||||| || || || ||| Sbjct 786092 CAGATCTTCGTTAAGACCCTCACGGGCAAGACGATCACGCTCGAAGTCGAGTCTTCTGAC 786033 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || || |||||||| |||||| Sbjct 786032 ACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAGCAA 785973 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||||||||| |||| | |||| || ||| || Sbjct 785972 CGCCTTATCTTCGCTGGGAAGCAGCTCGAAGATGGCCGGACGTTGTCCGACTACAACATC 785913 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 785912 CAGAAGGAGTCGACGCTTCATCTCGT 785887 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct 786373 CAGATCTTTGTCAAGACTCTCACGGGAAAGACTATCACTCTGGAGGTCGAGAGCTCTGAC 786314 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||| || || || ||||||||||| ||||| Sbjct 786313 ACAATCGACAATGTTAAGGCTAAGATTCAGGATAAGGAGGGCATCCCTCCGGATCAGCAG 786254 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||| | ||||| || | || || | || || ||| || Sbjct 786253 CGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTGTCTGACTACAACATC 786194 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || || || Sbjct 786193 CAGAAGGAGTCCACGCTTCACCT 786171 >seq199 Length=104010 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || || ||||| ||||| ||| ||| || Sbjct 100129 CAGATTTTCGTCAAGACGCTCACGGGCAAGACCATTACCCTGGAGGTCGAATCCTCTGAT 100188 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||| || || ||||| || ||||||||| Sbjct 100189 ACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAGCAA 100248 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| || || | || ||| |||| |||||| || Sbjct 100249 CGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTTTCCGACTATAACATC 100308 Query 178104 CAAAAAGA 178111 || || || Sbjct 100309 CAGAAGGA 100316 Score = 136 bits (150), Expect = 1e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| ||||| ||||| || ||| Sbjct 99852 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCATCGGAC 99911 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || || || ||||| ||||| Sbjct 99912 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAGCAG 99971 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| |||| || ||||||| ||| || Sbjct 99972 CGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAACATC 100031 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| ||||| || |||| Sbjct 100032 CAGAAAGAGAGCACACTTCACCTTG 100056 Score = 136 bits (150), Expect = 1e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || |||||||| || || ||||| ||||| || || ||| Sbjct 100408 CAAATCTTCGTCAAGACCCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCCGAC 100467 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| ||||| |||||||||||||| || Sbjct 100468 ACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAACAG 100527 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||||||||| || | || || | || || ||| | Sbjct 100528 CGTTTGATCTTCGCTGGCAAGCAGCTCGAAGACGGGCGAACGCTCTCTGACTACAACATT 100587 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || |||||||||| Sbjct 100588 CAGAAGGAGAGCACGCTGCATCTTG 100612 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||| | || || || |||||||| ||||| || || || ||| Sbjct 100686 CAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAAGTCGAGTCGTCTGAC 100745 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| || || || |||||||| Sbjct 100746 ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATTCCGCCTGACCAGCAG 100805 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | || || | || |||||| | Sbjct 100806 CGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACGCTCTCGGACTATAACATT 100865 Query 178104 CAAAAAGA 178111 || || || Sbjct 100866 CAGAAGGA 100873 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||||||| ||||||||||| || ||||||||||| || |||||||||||||| | ||| Sbjct 99670 ATCCCTCCCGACCAGCAACGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGGCGCACT 99729 Query 178086 CTTGCCGATTATAACGTCCAAAAAGA 178111 ||| | || || ||| |||| || || Sbjct 99730 CTTTCTGACTACAACATCCAGAAGGA 99755 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| |||||||| || || || |||||||||||||| || ||| ||| Sbjct 99502 CAAATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 99561 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 || ||||| || || || |||||||||||||| || || Sbjct 99562 ACGATCGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGG 99602 >seq57 Length=802683 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| |||||||| || || ||||| ||||| || || ||| Sbjct 362918 CAAATCTTCGTCAAGACTCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCCGAC 362977 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| ||||| |||||||||||||| || Sbjct 362978 ACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAACAG 363037 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| ||||| || | || || |||| || ||| || Sbjct 363038 CGTTTGATCTTCGCTGGTAAGCAGCTAGAAGACGGGCGAACGCTCTCCGACTACAACATC 363097 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || |||||||| Sbjct 363098 CAGAAGGAGAGCACGCTGCATCT 363120 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| ||||| ||||| || ||| Sbjct 362360 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTCGGAC 362419 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||| |||||||| || || || || ||||| ||||| Sbjct 362420 ACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCACCGGATCAGCAG 362479 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| |||| || ||||||| ||| || Sbjct 362480 CGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAACATC 362539 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 362540 CAGAAAGA 362547 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || || ||||| ||||| ||| || || Sbjct 362637 CAGATTTTCGTCAAGACGCTCACGGGCAAGACCATTACCCTTGAGGTCGAATCATCTGAT 362696 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||| || || ||||| || ||||||||| Sbjct 362697 ACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAGCAA 362756 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| || || | || ||| |||| |||||| || Sbjct 362757 CGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTTTCCGACTATAACATC 362816 Query 178104 CAAAAAGA 178111 || || || Sbjct 362817 CAGAAGGA 362824 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||| | || || || |||||||| |||||||| || || ||| Sbjct 363196 CAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAGGTCGAGTCGTCTGAC 363255 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || ||||| || || || |||||||| Sbjct 363256 ACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCGCCTGACCAGCAG 363315 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| ||||| || | ||||| | || |||||| | Sbjct 363316 CGCTTGATCTTCGCTGGCAAGCAGCTGGAAGACGGTCGTACTCTCTCGGACTATAACATT 363375 Query 178104 CAAAAAGA 178111 || || || Sbjct 363376 CAGAAGGA 363383 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||||||| ||||||||||| || ||||||||||| || |||||||||||||| | ||| Sbjct 362178 ATCCCTCCCGACCAGCAACGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGGCGCACT 362237 Query 178086 CTTGCCGATTATAACGTCCAAAAAGA 178111 ||| | || || ||| |||| || || Sbjct 362238 CTTTCTGACTACAACATCCAGAAGGA 362263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727714445844