Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1836 118 9e-22 seq117 114 1e-20 >seq1836 Length=575610 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||||||| || ||||| |||||| Sbjct 191913 CACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCCTC 191972 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| | |||||||| |||||||| |||||||||||||| Sbjct 191973 GAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 192032 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | |||||| |||| || | ||| || Sbjct 192033 GATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTT 192092 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || || |||||||| Sbjct 192093 GCCCGTGAGAGTCTTAACGAAGATCTGCAT 192122 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| ||||||||||| | || | ||||| | ||| || ||| Sbjct 190959 GTGGACTCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAACTGCTTCCCA 191018 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||||||||| || || || || ||||||||||| ||||| || Sbjct 191019 GCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATTTTCGCCTTG 191078 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||||||||| | || | ||| || ||||||| || Sbjct 191079 ACGTTGTCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCGGTCAACGTC 191138 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || ||||||||||||||| || Sbjct 191139 TTCACAAAAATCTGCATGCCT 191159 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| || | | || | ||||| || ||||| || ||||| ||||| ||| Sbjct 191383 TACCACCGCGCAACCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGG 191442 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || || || | |||||| || ||| ||||||| |||||||||||||||| Sbjct 191443 ACAGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAG 191502 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||||||||| || || ||| || || | |||| ||| || | | ||| | Sbjct 191503 GGATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAA 191562 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | || | || || || || || || || || || || |||||| Sbjct 191563 CCTCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACGAATATTTGCATG 191612 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| |||||||||||| Sbjct 192147 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTG 192206 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||||||| ||||||| |||||||| |||||||| |||| Sbjct 192207 CTTTCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGC 192247 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || || ||||| || || | ||| || || Sbjct 191698 GTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTGCTTGCCC 191757 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || ||||||||||||||||| |||||||||||||| || || || Sbjct 191758 GCAAAAATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 191817 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | |||||| |||| || | ||| ||||| || ||||| Sbjct 191818 ACGTTGTCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTC 191877 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 191878 TTGACGAAGATTTGCAT 191894 >seq117 Length=384797 Score = 114 bits (126), Expect = 1e-20 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | ||| ||| || ||||||||||| || || || ||| || || Sbjct 361754 ACCAAGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTCCGCCCGTCTTC 361813 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| ||||||| |||||||| || ||||| || ||||||||||| Sbjct 361814 GAGCTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTG 361873 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| ||| ||||||| ||| | || || Sbjct 361874 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTT 361933 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || |||||||| Sbjct 361934 CCCGGTCAACGTCTTGACGAAGATCTGCAT 361963 Score = 114 bits (126), Expect = 1e-20 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||| || || |||||||| ||| | ||||| |||||| Sbjct 362036 ACCAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTC 362095 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || ||||| |||| ||||| ||||| || || || || |||||||||||| Sbjct 362096 GAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTG 362155 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||| || || | |||| |||||| | ||| ||||| | ||| | || || Sbjct 362156 AATCTTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTT 362215 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || || |||||||| Sbjct 362216 GCCCGTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || ||||| ||||| | ||| || || Sbjct 361473 CAGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTACGGCCGTC 361532 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | ||| || |||||| |||| || |||||||| || || || |||||||||||||| Sbjct 361533 CTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCCTCCTTGTC 361592 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || || | |||| |||||||| ||| ||||||| || | ||| Sbjct 361593 CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGAGTGATCGT 361652 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||| || || || || |||||||| Sbjct 361653 CTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 361685 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| | || || |||||| ||||| || |||||| | Sbjct 362332 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAAGCTGCTTACCAGCGAA 362391 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| ||||||||||| || || || |||||||| || || || || || | Sbjct 362392 GATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATCTTGGCCTTTACGTT 362451 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||||| ||| ||||||| || | || || || || || || || || Sbjct 362452 GTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCCCAGTGAGGGTCTTGAC 362511 Query 118727 AAAAATCTGCATG 118739 ||| ||||||||| Sbjct 362512 AAAGATCTGCATG 362524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433818884243176