Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1836 138 7e-28 seq117 116 2e-21 >seq1836 Length=575610 Score = 138 bits (152), Expect = 7e-28 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| |||||| ||| |||| |||||||||||||| || ||| Sbjct 191704 TCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCTTCCAACTGCTTGCCCGCAAAA 191763 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||| ||| || | || ||||||||| ||||| ||| | | | Sbjct 191764 ATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 191823 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| ||| ||||| || | |||||| || ||||| |||||||| || || Sbjct 191824 TCAATCGTGTCGGACGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTGACG 191883 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 191884 AAGATTTGCAT 191894 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||| ||||| | || || ||||| |||||||| |||||| Sbjct 191896 CCGCCACGGAGGCGAAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 191955 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || | |||||||||||| || Sbjct 191956 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 192015 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| ||| ||||| Sbjct 192016 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGACGACTCGACT 192075 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||| || ||||| |||||||| || || |||||||||||| Sbjct 192076 TCGAGCGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATCTGCATC 192123 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| || || || ||||| | || || ||||| || |||||||||||| Sbjct 191385 CCACCGCGCAACCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGAC 191444 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| |||||||| || || ||||| ||||| |||||||| ||| || Sbjct 191445 AGCGTCCGGCCGTCTTCCAACTGTTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 191504 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || |||||| ||| | | | | || | ||||| || || || Sbjct 191505 ATGCCCTCCTTATCCTGGATCTTTGCCTTGACGTTGTCGATGGTATCGGAGGACTCAACC 191564 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| ||||| || || ||||| || || || || || ||||| Sbjct 191565 TCCAGCGTTATGGTCTTTCCCGTGAGCGTCTTGACGAATATTTGCAT 191611 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| ||||| || || |||| |||| || | |||||| || ||||| Sbjct 191193 TCCTTCTGGATGTTATAGTCCGAAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAG 191252 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || ||||||||| || | | |||||| || ||||| ||| | | | Sbjct 191253 ATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTATCTTGGATCTTCGCCTTGACGTTG 191312 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| |||| ||||||||| || ||||| || || ||||| Sbjct 191313 TCGATCGTGTCCGAAGACTCGACCTCCAACGTGATGGTCTTCCCGGTAAGCGTCTTCACG 191372 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 191373 AAGATCTGCAT 191383 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || |||||||| || || ||| | | |||| ||||||||||| || ||||| Sbjct 190965 TCCTTTTGGATGTTGTAATCCGAAAGCGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAG 191024 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | | ||||||||| || || ||| | | | Sbjct 191025 ATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATTTTCGCCTTGACGTTG 191084 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| ||| ||||| || | ||||| || || ||||| | || |||||| Sbjct 191085 TCAATCGTGTCGGACGACTCGACCTCAAGAGTGATCGTCTTCCCGGTCAACGTCTTCACA 191144 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 191145 AAAATCTGCAT 191155 >seq117 Length=384797 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | |||||| ||||| | || || || ||||| ||||| || || || Sbjct 361459 CCGCCACGGAGACGCAGCACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAA 361518 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| |||||||||||||| ||||| || || ||||||||||| || Sbjct 361519 AGAGTACGGCCGTCCTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGA 361578 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | || | ||| || || Sbjct 361579 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACC 361638 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || ||||| | || || || ||||||||||| Sbjct 361639 TCGAGAGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 361685 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 || || | ||| || || ||||| |||||||||||||| ||| || | || || | | Sbjct 362040 AGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCATCCTCGAGC 362099 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| || || || || || |||||||| || | | ||||||||| ||| Sbjct 362100 TGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAATC 362159 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 ||| ||| | || | | || | || | || || || || | || || || ||||| Sbjct 362160 TTTGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGGGTAATAGTCTTGCCC 362219 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| ||||| ||||||||||| Sbjct 362220 GTAAGAGTCTTCACGAAGATCTGCAT 362245 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | || || || ||||| |||||||||||||| || || | || || | | Sbjct 362318 AGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTCCGACCATCCTCAAGC 362377 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 ||||| || ||||| ||||| |||||||| || ||| | | |||||| || ||| Sbjct 362378 TGCTTACCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATC 362437 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||||| | | | || | || | || || || || | ||| ||||| || || Sbjct 362438 TTGGCCTTTACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGCGTAATGGTCTTCCCA 362497 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || |||||||||||||| Sbjct 362498 GTGAGGGTCTTGACAAAGATCTGCAT 362523 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34167 CGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCT 34226 || |||| || | || ||||| | || || || ||||| ||||||||||| ||||| Sbjct 361743 CGTGCAGACTTACCA--AGGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGG 361800 Query 34227 GACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGC 34286 || |||| || | |||||| || ||||| ||||| ||||||||||| || | | Sbjct 361801 TCCGCCCGTCTTCGAGCTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTC 361860 Query 34287 TCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCA 34346 ||||||||| ||||| ||| | | | | || | || | || || || || | Sbjct 361861 CCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGA 361920 Query 34347 CCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || ||||| | || || || ||||||||||| Sbjct 361921 GGGTGATAGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 361963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323063424255680